On moving to that other configuration file the log looks different:
Jul 2 15:08:28 goliath.bobsuruncle.net /usr/bin/amavisd[6691]: SpamControl: initializing Mail::SpamAssassin
Jul 2 15:08:29 goliath.bobsuruncle.net /usr/bin/amavisd[6691]: SpamControl: done
Jul 2 15:08:32 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: starting. /usr/bin/amavisd at goliath.bobsuruncle.net amavisd-new-2.2.0 (20041102), Unicode aware
Jul 2 15:08:32 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: user=, EUID: 0 (0); group=, EGID: 0 20 80 5 29 4 3 2 1 0 (0 20 80 5 29 4 3 2 1 0)
Jul 2 15:08:32 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Perl version 5.008006
Jul 2 15:08:33 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Net::Server: 2008/07/02-15:08:33 Amavis (type Net::Server::PreForkSimple) starting! pid(6687)
Jul 2 15:08:33 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Net::Server: Binding to UNIX socket file /var/amavis/amavisd.sock using SOCK_STREAM
Jul 2 15:08:33 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Net::Server: Binding to TCP port 10024 on host 127.0.0.1
Jul 2 15:08:33 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Net::Server: 2008/07/02-15:08:33 Can't connect to TCP port 10024 on 127.0.0.1 [Address already in use]\n at line 86 in file /System/Library/Perl/Extras/5.8.6/Net/Server/Proto/TCP.pm
Jul 2 15:08:33 goliath.bobsuruncle.net /usr/bin/amavisd[6687]: Net::Server: 2008/07/02-15:08:33 Server closing!
Jul 2 15:09:06 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) ESMTP::10024 /var/amavis/amavis-20080702T150906-06692: <simon@bobsuruncle.com> -> <simon@bobsuruncle.com> Received: SIZE=1110 from goliath.bobsuruncle.net ([127.0.0.1]) by localhost (goliath.bobsuruncle.net [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 06692-01 for <simon@bobsuruncle.com>; Wed, 2 Jul 2008 15:09:06 +0100 (BST)
Jul 2 15:09:06 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) Checking: [10.0.1.55] <simon@bobsuruncle.com> -> <simon@bobsuruncle.com>
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) p001 1 Content-Type: text/plain, size: 445 B, name:
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) local delivery: <simon@bobsuruncle.com> -> <spam-quarantine>, mbx=/var/virusmails/spam-0815ce848b6b1dcd58ac397055b01353-20080702-150906-06692 -01.gz
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) SPAM, <simon@bobsuruncle.com> -> <simon@bobsuruncle.com>, Yes, hits=995.484 tag=-999 tag2=1 kill=22 tests=ALL_TRUSTED, AWL, BAYES_00, GTUBE, quarantine spam-0815ce848b6b1dcd58ac397055b01353-20080702-150906-06692-01 (spam-quarantine)
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) FWD via SMTP: [127.0.0.1]:10025 <simon@bobsuruncle.com> -> <simon@bobsuruncle.com>
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) Passed, <simon@bobsuruncle.com> -> <simon@bobsuruncle.com>, quarantine spam-0815ce848b6b1dcd58ac397055b01353-20080702-150906-06692-01, Message-ID: <4E1761CE-6213-4B8B-AC33-E2CFE9C1F6B6@bobsuruncle.com>, Hits: 995.484
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) Passed SPAM, <simon@bobsuruncle.com> -> <simon@bobsuruncle.com>, Hits: 995.484, tag=-999, tag2=1, kill=22, 0/Y/Y/Y
Jul 2 15:09:07 goliath.bobsuruncle.net /usr/bin/amavisd[6692]: (06692-01) TIMING [total 1063 ms] - SMTP EHLO: 50 (5%), SMTP pre-MAIL: 3 (0%), mkdir tempdir: 1 (0%), create email.txt: 2 (0%), SMTP pre-DATA-flush: 14 (1%), SMTP DATA: 1 (0%), body_hash: 2 (0%), mkdir parts: 4 (0%), mime_decode: 42 (4%), get-file-type1: 28 (3%), decompose_part: 2 (0%), parts_decode: 0 (0%), spam-wb-list: 12 (1%), SA msg read: 2 (0%), SA parse: 10 (1%), SA check: 656 (62%), update_cache: 1 (0%), write-header: 31 (3%), save-to-local-mailbox: 3 (0%), post-do_spam: 3 (0%), fwd-connect: 59 (6%), fwd-mail-from: 3 (0%), fwd-rcpt-to: 4 (0%), write-header: 7 (1%), fwd-data: 1 (0%), fwd-data-end: 26 (2%), fwd-rundown: 3 (0%), main
logentry: 16 (2%), update_snmp: 0 (0%), unlink-1-files: 75 (7%), rundown: 1 (0%)
I know that's probably a little hard to read!
Simon