If you have not run Disk Utility and used +Repair Disk Permissions+ since upgrading to Snow Leopard, you may want to do that as a first step.
Then, to further isolate your problem, create a new admin user account in System Preferences
Accounts pane.
http://docs.info.apple.com/article.html?path=Mac/10.5/en/8235.html
Log out and log in to the new account. You will be using default user preference settings and only standard processes will be running in the background (unless you installed third-party software that runs at the system level). Try whatever causes the problem in the new account, and note if it recurs.
I have done this for the several minor issues I ran into, and in the new post-upgrade account, there was never a problem. Then, I did some more detailed trouble-shooting in my pre-SL user account to figure out what was causing the problem (usually a preference file that I had to trash).