I have the same but PARTIAL problem you have.
I homebrew'd Wine 9.0 onto my 12.7 OS external, I am the Admin (was ROOT admin owner/etc BEFORE the bad move of upgrading the internal Mac Mini M1 to Sonoma, which permanently flaglocked the permissions and continues to infect new externals I buy even if not booting with the internal...). The drives didnt 'need the internet' to be validated and at no time did I ever agree knowingly to leave access to my own externals to APPLE to determine validation. It wasnt a problem before the 'upgrade'
As for the WINE problem, how did you install it? Compiled it from source, used homebrew, or a pkg app somewhere?
For me: It shows up as an app in applications, click it and it opens terminal, I get this series of fail/error results when I follow instruction to .exe the app in terminal:
Pic. #2
What SHOULD have helped both the external Thunderbolt enclosure SSD drive 'permissions block' Apple put on, and this problem of blocking emulator operation, was the following I tried.
I turned the Security drop down menu via Recovery OS to Partial from Full
then in Recovery still, typed in the csrutil disable command
I temporarily tried the Gatekeeper shut off command tho not likely part of the problem
Turned off the SIP 'protection'
Went in thru the system/library/coreservices folder chain into DIrectory Utility app found there, and reconfirmed the ROOT setting by entering my password after unlocking it.
None of that either changed the following Pic 2 errors nor ended the undesired Apple intrusion into my privacy choices. SECOND picture is the new 'you must have an internet connect to confirm the external' nonsense that they alone apparently get to decide is accessibility to my externals.
I would hate to think that backup/erase/reinstall any OS or data only drive is the way to get around this nonsense.
I suspect this Apple Gets To Choose Validation/permissions thing stops such terminal usage or installs they dont like.
if any of the above works for anyone, or anyone wants to pitch in some terminal command or Recovery OS steps I could try, maybe we both can run WINE and also have less hassled external drives.
