MacOS Sequoia filling up with system data

I have a 2023 Mac Studio M2 with 1 TB SSD and a week ago there was 600GB of free space. I updated Adobe CC yesterday and when I reopened After Effects I got the message that I didn't have enough disk space for the cache. I checked and there was only 90GB free space. I then restarted the machine, deleted the Adobe cache (6gb), deleted my Time Machine snapshots, deleted all the other caches. I ended up with 258GB of free space. A check of the storage list shows that I still have 492GB of system data and I can't get rid of it.


Any suggestions?


Mac Studio, macOS 15.0

Posted on Oct 17, 2024 12:49 PM

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Question marked as Top-ranking reply

Posted on Mar 13, 2025 7:08 PM

With the help of Apple support and many hours of troubleshooting and diagnostics we were able to identify the problem and regain the disk space from System Data. The culprit in my case was Carbon Copy Cloner a backup and disk cloning utility of which a snapshot was occupying 416GB of disk space when it should not have been.


To get rid of this I booted into recovery mode while holding "Command & R" while starting the computer

Ran Disk Utility and selected View > Show APFS Snapshots > selected the snapshot and deleted it.

Upon restart my disk usage was somewhat back to normal. I have a 1TB drive and used space was 444GB but Available space said 998GB. Clearly there was some lingering calculation challenges but Apple said that would sort itself out in time or would update correctly if an OS update was done.

Sure enough after I updated to Sequoia 15.3.2 everything appears to be back to normal.


Fingers crossed that things remain that way and hopefully this may help some of you also experiencing this issue!

72 replies

Feb 19, 2025 5:16 PM in response to DGaryC

My phone started having trouble a week ago - opening apps caused my phone to restart, apps wouldn't open (including my Tesla app which I needed to get back into my car), camera, phone, face ID, etc. Super unstable after the 18.3.1 update. I erased my phone and restored from backup twice after cleaning all large files off and the system data grew. It kept using all my storage and I couldn't clean it up. After working on it for days, I decided to erase, but not to bring anything over (no backup or anything) and still my system data was full. I did a DFU (device firmware upgrade) and while it took all day, it fixed the problem. I had to look the instructions up online and I restored a backup from a few days ago. Storage is freed up finally! I did open a support ticket and Apple is aware of the issue and working to resolve. That's the only info I could get. Best of luck.

Mar 6, 2025 10:13 AM in response to dkind123

Not yet but I have an open support case with Apple on this. I have spent countless hours on this and up to this point, over three hours on the phone with them trying to figure out what is going on. I have run several rounds of diagnostics and provided the output to them which hopefully will reveal root cause.

My scenario is my 1TB drive has 680GB being eaten up by system files.


Will share what I find out

Mar 6, 2025 6:07 PM in response to GriffithO

I have read through all of these posts related to this issue and while some of the troubleshooting steps such as cache clearing, booting to safe mode, culling TimeMachine entries, downgrading to a previous OS, etc., none appear to address and remedy root cause.


I have a case open with Apple and hope to be able to get to the bottom of this and remedy the issue without having to wipe my drive and start over. That is a solution that none of us should even remotely consider as acceptable!!


There has to be a fix to this problem and if any of you reading this are experiencing a similar issue, please contact Apple and open a support ticket. The more official visibility this has the more likely we are to get a resolve!

May 5, 2025 12:30 PM in response to Malkster

Malkster, you are so correct. "It seems designed to prevent us from understanding it."


Once upon a time (I've been a Mac user since 1989), Windows users had to know DOS. They had to be almost programmers to keep their machines functioning. Mac users, on the other hand, were designers, musicians, and creators. They didn't know what went on under the hood and didn't care, but Macs functioned without tinkering anyway. In fact, as you say, Apple designed their machines to prevent the user from understanding them (you needed a special tool to open the case).


Twenty years ago, among other things, I was the Mac IT manager for a large company and was responsible for 140 iMacs. I was allocated two hours a week – and that's all I needed. The company also had 12 Windows machines and a full-time IT manager to keep them running.


Macs are supposed to run without fiddling, tweaking, or tinkering. Unfortunately, MacOS has become so complicated that many users are now expected to open Terminal and learn text commands like it's 1989.


Luckily for us, the machines will likely continue to run for years without the user ever learning terms like 'System Data'. The Mac will ultimately clean itself up and will only grind to a halt if it is genuinely stuffed full of photos and videos.

May 12, 2025 2:56 PM in response to DGaryC

I'm seeing something similar, in my scenario the disk space is freed up after a reboot but then, over time it gets eaten up again. Bringing up the storage viewer, it just spins on 'Calculating...' for Applications and System Data and never returns a value.

I've tried disabling Spotlight search and the Calculate All Sizes solutions mentioned here but still this goes on. Is this likely to be a different issue?

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MacOS Sequoia filling up with system data

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