Here's a possible solution to fix all permissions on your boot drive:
Boot into
single-user mode and at the prompt enter these commands pressing RETURN after each:
mount -uw /
chown root:admin /
chmod 1775 /
reboot
After rebooting Set the following Directory permissions. You can paste these lines or enter by hand, but be careful to enter them correctly.
sudo su
Enter your admin password when prompted. It will not be echoed.
chown root:admin /Applications
chmod 0775 /Applications
chown root:admin /Library
chmod 1775 /Library
chown root:admin /System
chmod 0775 /System
chown root:admin /Users
chmod 0775 /Users
chmod -R -N /Applications
chown -R :admin /Applications/*
I suggest you first print these instructions out using a large mono-spaced font so you can read them correctly.