Have learned much since the last post. I've ordered a new custom computer, so I moved everything off the desktop onto an external 2 TB drive and connected to a 6-mo old Toshiba notebook. Re=built, re-connected, followed web advise and had all on e:\itunes\itunes media. Realized that the Windows version of iTunes makes no attempt to see if it has a file before it makes another copy of the file so Sing, expands to include a Sing 1, and s Sing 2, multiplying your library size everytime you are dumb enough to click File/Library/Organize/Consolidate. I spent several days manually deleting these duplicates and repointing itunes to the file. It was often easier to just delete the songs from iTunes and reload the corrected album subdirectory. But I still had a few thousand missing files. Interestingly, last night, I observed that the Automatically add to iTunes was not Automatically adding to iTunes so I went hunting. The folder location had changed without me to e:\iTunes Media and the Automatically add to iTunes did work from that directory. Before this burp, a review of the missing files from the sync listing was mostly iTunes U files, so I looked into the iTunes U and discovered that all of my Audiobooks, iTunes U files, and .TVShows had changed from these designations back to Music files so it could not sync TV shows. They were **** gone from the phone. They were still in the folder TV Shows but get info claimed them as Music. I highlighted all in TVShows and refiled as TV shows and it synced them back to my phone, I have had 2-instances of ERROR, Cannot save iTunes library file since the move to the notebook and external drive. Close iTunes and reopen and re-do whatever you just did in the last 10-15 minutes and all seems well.
I realize that the code requires the files to be in e:\itunes so I let the organize music files start consolidating again. It's about 1/2 done after running all night. Now I have to dig up some more hard drive space to move the old files to when complete, I have to seperate iTunes knowledge of where the old files were to avoid the file duplication problem. And I no longer trust iTunes to get all the files so I must keep them until confirmed. I still have numerous tracks missing from albums but nothing is read-only or hidden anymore so maybe this will get better. Re-building the library is a distainful activity because of the lack of metedata to the apps, so it will require me to re-folder 20-pages of apps. That's a long PIA for both the phone and the iPad so I'm trying to avoid it as much as possible. I love the end-result of a well synced phone and iPad but the user time required here has become horrendous. If I knew how to jailbreak from iTunes, I would. Growing to hate Apple software quality controls!