Not as a resolution.
I want you to try with just one set, and that is where they should be.
you didn't say where and how but A1:2 is where highest density should be.
This is not a fix.
And the 512s should be on the lower Riser B
It could (lot of things "could" be)
Run Apple Hardware Test off your OEM DVD - it lists AHT on the label, and to hold down D on startup to run to test RAM and Risers
Also retry with just the 512MB alone, eiither on top riser or split A1: and B1:2
Risers are interchangeable and can go in top or bottom slot.
www.macupdate.com SmcFanControl 2.3+ launch and set profiles - it will be on your menu bar only.
RAM is in pairs and if one fails it could affect both or be the Riser. Without wasting time testing etc - as I've 'been there' with others and even if it appears okay today it will fail again and you don't want to run with flakey DIMMs.
Riser A has the 4 x 512MB now?
Air flow into the memory cage can be poor circulation.
And $110 for 8GB is the best price and quality I have seen.