nuno1959

Q: clean, fresh re-install & back to the same problems !?

  hi guys

 

  after a spell of LOTS of beach balls & things hanging out of the blue driving me nuts, i decided to re-download M.Lion, make a bootable USB drive, erase Macintosh HD,  i verified/repaired the disk w/ D.Utility & proceeded to re-install Mountain Lion + my iLife apps from the original install DVD that came w/ my iMac ( 27'' late 2009, i7, 16GB RAM ) 

 

being at a loss pinpointing what was causing the trouble, i ran an Hardware Test ( all good.. ) reset the Pram + SMC...everything short of drowning it w/ WD40 ;-)

 

  it all went smoothly & once done, i checked for software updates & installed them, restarted the computer & started re-installing the non Apple apps i had but NOT before i checked Roaring Apps for any imcompatibilities w/ M.Lion - because of some doubts, a few WERE left out !

 

  it's been a couple of days now, at 1st all was well but slowly the ''clunkiness'' came back :

 

  1 - one minute Safari takes quite a long time to launch, the other it doesn't & just zipps through whatever in a blink of an eye..

  2 - same with Mail

  3 - i downloaded a couple of bigger videos from YouTube ( 1.something up to 2.5GB..) threw then in the Trash selected Secure Empty Trash as i like doing &....it either empties it in a sec OR ( most likely.. ) it hangs for a LOOOONG time before anything happens

 

  sometimes it goes up to half the progress bar ( or 1/3 or 2/3.. ) & then it just hangs in there - 10, 15, 20 or more minutes

 

  other times it just DOES NOT budge & i'm forced to re-launch the Finder - if i try to Sec. Empty again sometimes it gives me ''...bla, bla can't empty because X, Y, Z is being used, etc..'' yet as far as i can determine NOTHING is using the file i'm trying to get rid of ?..

 

   to make sure everything is OK i repaired permissions w/ D.Utility often, re-start, got a few more large videos ( these seem to be the ones that are REALLY difficult to get rid of.. ) trash them, try emptying the Trash &.....AGAIN the same thing !?

 

   ran a full Onyx ''cycle'' to clean, re-set, re-whatever it is it does & after clicking on empty the Trash i got this message, despite the Trash can being empty :

 

Screen Shot 2012-08-21 at 6.56.00 PM.png

 

  & this goes on & on & it's getting REAL OLD, REAL FAST !

 

  now, i've looked in the Forum & found a few complaints about difficulties emptying Mountain Lion's Trash but after reading many, it didn't look like they are similar cases to mine hence my posting this..

   just out of curiosity, i ''loaded'' the Trash before i started writing this, slected Sec. Empty Trash at exactly 10.51 PM & at 11.37 PM it managed to secure empty about 6.5GB of video files...

 

before i forget, a message i get a lot when repairing permissions is this : 

 

Group differs on “Library/Preferences/com.apple.alf.plist”; should be 80; group is 0.   - this one comes up A LOT MORE than anything else...

 

  the only things i can think of as capable of perhaps ''troubling'' my machineare these :

 

  1 - the Sideffects thingy ( for colored icons on my Finder windows sidebar.. ) found here - http://macmatrix.blogspot.pt/p/sideeffects.html  but i tried uninstalling it ( AppZapper, etc.. ) repair permissions, re-start, run computer& nothing changed so i installed it again..

 

  2 - i have set up a Raid1 array w/ D.Utility for Time Machine duty, using 2 Western Digitall My Book USB drives, each w/ 2TB capacity connected via a Logitech powered 4 port Premium USB hub, which were erased, formatted Mac OS Extended (Journaled), the works...

 

Screen Shot 2012-08-21 at 11.43.21 PM.png

 

  3 - a couple of FW800 NewerTech Guardian Maximus enclosures connected to my iMac's single FW800 output, each loaded w/ 2 X Western Digital 3TB Caviar Green drives which i have been assured by OWC would work fine ( & did in Lion.. )

  one is for my iTunes Library & the other for all my DVD collection

 

  4 - a custom Dock made w/ DragThing, which i also un-installed, tried, everything was the same so i re-installed

 

  among all this upheaval a few things HAVE improved their behavior :

 

  A - iPhoto now launches almost instantly despite i have a few tens of thousands of large size photos in it !? before it took AGES to launch & to shut down & now it's very zippy, even while editing photos

 

  B - same w/ Preview - it used to hang endlessly while doing eidts to multiple images for example, now it doesn't

 

  C - printing & scanning w/ my HP C6180 Photosmart is FLAWLESS - before it could get ''temperamental''

 

  at this point i have been going around so much trying to troubleshoot what/where/how/etc...i've kindda lost my North so to speak

 

  i would be EXTREMELY grateful if anyone would be so kind as to drive me through a process of TRYING to determine WHAT is causing this MOST FRUSTRATING behavior

 

last but not least i ran a full ClamXav scan of the whole computer + external drives : EVERYTHING was OK

 

  sorry for my VERY long post

2009 27'' iMac i7, 16GB Ram , Mac OS X (10.7), 2 X 1TB + 2 X 2TB W.Digital USB

Posted on Aug 21, 2012 5:05 PM

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Q: clean, fresh re-install & back to the same problems !?

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  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 21, 2012 6:21 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 21, 2012 6:21 PM in response to nuno1959

    nuno1959 wrote:

     

    ran a full Onyx ''cycle'' to clean, re-set, re-whatever it is it does & after clicking on empty the Trash i got this message, despite the Trash can being empty :

     

    Screen Shot 2012-08-21 at 6.56.00 PM.png

    That's not your trash can (it belongs to the "root" user) so it's not surprising that you can't empty it. There are ways to do that, but I doubt that the amount of space is worth the trouble.

    before i forget, a message i get a lot when repairing permissions is this :

     

    Group differs on “Library/Preferences/com.apple.alf.plist”; should be 80; group is 0.   - this one comes up A LOT MORE than anything else...

    Check out Mac OS X: Disk Utility's Repair Disk Permissions messages that you can safely ignore. It hasn't been update in over a year and doesn't even include Lion, but it should give you some idea of how these things go.

    i would be EXTREMELY grateful if anyone would be so kind as to drive me through a process of TRYING to determine WHAT is causing this MOST FRUSTRATING behavior

    Since I have not been through this myself, I'm hesitant to say anything, but I know some users that had a lot more executable PPC only code installed than they thought who were helped by running these scripts from Robert Harder Check for PowerPC Programs Before Upgrading to Lion.

  • by nuno1959,

    nuno1959 nuno1959 Aug 21, 2012 6:39 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 21, 2012 6:39 PM in response to MadMacs0

    Hi MadM

     

    & thanks for your input !

    well to start with i'm glad to hear that the Onyx message is not a sign of a problem & that it's normal i couldn't ''see that stuff'' in the Trash - because it's icon sure looked empty to me...

    as for the list, i have been through that permissions list but i actually didn't find that one i posted hence my concern it might indicate some sort of Apocaliptic pre-meltdown Chernobyl style of event to take place here at home...LOL...

      as for the PPC programs what can i say ? i have none that I'M AWARE OF !? but then again....i'm running on e of the supplied comands as i type this & Treminal says : this could take a while...

     

    so i'll post back as soon as something does

     

    thanks though ! ;-)

  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 21, 2012 6:56 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 21, 2012 6:56 PM in response to nuno1959

    Something that may help other troubleshooters which was written specifically for the Forum by etresoft is EtreCheck. After you've cleaned out any PPC only code (it's not just applications) run this and post the results.

  • by nuno1959,

    nuno1959 nuno1959 Aug 21, 2012 7:16 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 21, 2012 7:16 PM in response to MadMacs0

    that looks good, i've run it & this is the result :

    Hardware Information:

              iMac - model: iMac11,1

              1 2.8 GHz Intel Core i7 CPU: 4 cores

              16 GB RAM

     

    System Software:

              OS X 10.8 (12A269) - Uptime: 0 days 8:8

     

    Disk Information:

              ST31000528ASQ disk0 : (1 TB)

                        disk0s1 (disk0s1) <not mounted>: 209.7 MB

                        Macintosh HD (disk0s2) /: 999.21 GB (822.06 GB free)

                        Recovery HD (disk0s3) <not mounted>: 650 MB

     

              OPTIARC DVD RW AD-5680H 

     

    USB Information:

              Apple Inc. iPhone

              Western Digital My Book 1110 2 TB

                        disk3s1 (disk3s1) <not mounted>: 209.7 MB

                        disk3s2 (disk3s2) <not mounted>: 2 TB

                        Boot OS X (disk3s3) <not mounted>: 134.2 MB

              Apple Internal Memory Card Reader

              Apple Inc. BRCM2046 Hub

                        Apple Inc. Bluetooth USB Host Controller

              HP Photosmart C6100 series

              Western Digital  My Book          2 TB

                        disk2s1 (disk2s1) <not mounted>: 209.7 MB

                        disk2s2 (disk2s2) <not mounted>: 2 TB

                        Boot OS X (disk2s3) <not mounted>: 134.2 MB

              APC Back-UPS ES 700 FW:829.D2 .I USB FW:D2 

              Apple Inc. Built-in iSight

              Apple Computer, Inc. IR Receiver

     

    FireWire Information:

              NewerTech GMAX 800mbit - 800mbit max

                        disk1s1 (disk1s1) <not mounted>: 209.7 MB

                        THE MOVIES (disk1s2) /Volumes/THE MOVIES: 3 TB (402.7 GB free)

     

    Kernel Extensions:

              at.obdev.nke.LittleSnitch          Version: 3862

     

    Problem System Launch Daemons:

                     [failed] com.apple.backupd-auto.plist

     

    Problem System Launch Agents:

                     [failed] com.apple.afpstat.plist

     

    Launch Daemons:

                     [loaded] at.obdev.littlesnitchd.plist

                     [loaded] com.adobe.fpsaud.plist

                 [not loaded] com.bjango.istatlocaldaemon.plist

     

    Launch Agents:

                     [loaded] at.obdev.LittleSnitchUIAgent.plist

                     [loaded] com.bjango.istatlocal.plist

                     [loaded] net.culater.SIMBL.Agent.plist

     

    User Launch Agents:

     

    User Login Items:

              iTunesHelper

              SIMBL Agent

              PowerboxInjector

              RelaunchFinder

              DragThing

     

    3rd Party Preference Panes:

              Flash Player

              Flip4Mac WMV

              Perian

     

    Internet Plug-ins:

              Flash Player.plugin

              FlashPlayer-10.6.plugin

              Flip4Mac WMV Plugin.plugin

              iPhotoPhotocast.plugin

              JavaAppletPlugin.plugin

              QuickTime Plugin.plugin

              Silverlight.plugin

              SpeedDownload Browser Plugin.plugin

     

    User Internet Plug-ins:

              FolxNetscapePlugIn.plugin

     

    Bad Fonts:

              None

     

    Top Processes:

              431.0 %          HandBrake

              43.2  %          find

              4.5   %          JavaApplicationStub

              3.3   %          WindowServer

              1.8   %          sandboxd

              1.3   %          EtreCheck

              1.2   %          mds

              0.7   %          iStatLocalDaemon

              0.6   %          fontd

              0.3   %          WebProcess

     

     

    meanwhile the Terminal thing seems to be still looking for but not finding anything or if there was something it would already have found something ? you think i can close it or shall i leave it running for a while longer ?

     

    Screen Shot 2012-08-22 at 3.12.38 AM.png

     

      & you see, this is what's most disconcerting about my computer's behavior, now for the past hour or so it has been TOTALLY devoid of ''gremlins'' -  just like an electrical problem in a car/motorcycle when you reach your dealer to have it checked it never shows itself kinda thing....ARGGG !!! very infuriating !...LOL...

  • by nuno1959,

    nuno1959 nuno1959 Aug 21, 2012 7:34 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 21, 2012 7:34 PM in response to MadMacs0

    OK now Terminal has finished searching & this is what it came up with :

    Screen Shot 2012-08-22 at 3.30.44 AM.png

     

    do you or anybody else recognise something to be ''discarded'' ?

  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 21, 2012 7:37 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 21, 2012 7:37 PM in response to nuno1959

    nuno1959 wrote:

     

    meanwhile the Terminal thing seems to be still looking for but not finding anything or if there was something it would already have found something ? you think i can close it or shall i leave it running for a while longer ?

    That's exactly what it should look like until it's finished, at which point it will tell you and leave the last list it produced "ppc-only.txt" on your desktop.  It produces several lists and compares them until it has found what it's looking for.

  • by nuno1959,

    nuno1959 nuno1959 Aug 21, 2012 7:42 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 21, 2012 7:42 PM in response to MadMacs0

    oops, sorry, yes i see what you mean - as you can tell by now i'm not used to Terminal AT ALL !

     

    i even found a few ''force empty trash'' type command lines to use with it but never did because since i don't know what they are about i was afraid to do more harm than good or even apply them for the wrong reasons, etc...

    as a rule, if i don't know about something, i don't mess with it

  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 21, 2012 7:41 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 21, 2012 7:41 PM in response to nuno1959

    nuno1959 wrote:

     

    OK now Terminal has finished searching & this is what it came up with :

    do you or anybody else recognise something to be ''discarded'' ?

    Doesn't look right. If there's no ppc-only file on your desktop then it failed. It was written to be run on Snow Leopard and I've run it successfully on Leopard, SL and Lion, but not Mountain Lion, so their could be an incompatibility in the script.

  • by nuno1959,

    nuno1959 nuno1959 Aug 21, 2012 7:45 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 21, 2012 7:45 PM in response to MadMacs0

    after i unzipped the downloaded file, i left it on my desktop after double clicking on it to run it - could that be what Terminal is pointing to ?

  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 21, 2012 10:18 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 21, 2012 10:18 PM in response to nuno1959

    nuno1959 wrote:

     

    after i unzipped the downloaded file, i left it on my desktop after double clicking on it to run it - could that be what Terminal is pointing to ?

    Terminal is definitely pointing to the script and saying it could not perform line 27 due to an inability to interpret the information it read from some file it ran across, so had to stop processing since there were no instruction on what to do if it encountered an error. I took a look at the script in TextEdit and I believe that line 27 is the last line of the section "Initial scan of whole hard drive for executable files". A couple of possibilities are that there was a change in file format with Mountain Lion that wasn't accounted for in the script or perhaps it just ran up against a corrupt file. In any case, I doubt that we can interest the developer in making any changes the script.

     

    But in the header of the script he offers a quick and dirty alternative. Copy and paste the following into a new Terminal window after the "$ " prompt:

     

    system_profiler SPApplicationsDataType | awk 'BEGIN { RS="" } /PowerPC/ {print PrevLine} {PrevLine=$0}'

     

    and hit return. Unfortunately it doesn't tell you where the files are located, so some searching may be necessary.

     

    I tried running it and in taking a quick look it seems to have found all the applications that the other script found, but not the Frameworks, PreferencePanes, other Library and Unix process that the longer one did. But it should give you something to start with.

     

    A couple of other ideas. I noticed that one of the PPC Only apps I have is HandBrake, but since I'm running it on a PPC Mac, it should be much older than the one you have. What's interesting is that in that EtreCheck output i noticed that HandBrake is using 450% of your CPU. I realize that it's function requires an intensive amount of computer power, but 450% strikes me as being excessive. You might want to make sure you have the latest version (0.98 released about a month ago) from http://handbrake.fr/downloads.php.

     

    The other thought was something I'm sure you don't want to hear, but often the behavior you are seeing is from a hard drive about to go bad, so if you have a utility capable of testing it that would be a good idea. And I'm not speaking of Disk Utility which can only check the directory, not the physical hard drive.

  • by nuno1959,

    nuno1959 nuno1959 Aug 22, 2012 2:25 AM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 22, 2012 2:25 AM in response to MadMacs0

      Hi MadMacs0

     

      love your username by the way, nice play on words..

     

      sorry for my late reply ! i woke up a while ago & just got to my computer :

    nothing like having a few time-zones between 2 people ''chatting'' to keep things interesting ! ;-)

     

      1st of all, yes, i'll definitely try & run the ''quick & dirty'' you suggest there & will get back to you on that one later..

      if i remember correctly i was running Disk Utility in the back verifying/repairing all my drives - could that have anything to do with it ?

     

      as far as what you pointed out regarding Handbrake i DID notice that sometime ago when i was frantically looking at Activity Monitor trying to make some sense of it & failling miserably i must confess - if written in martian it would make as much sense to me as it is...LOL..

       now, slowly i begin to understand SOME of it - i guess that's the ONE advantage these sort of troubles are good for : learning something more about one's computer & how it works !..

     

      anyway not having a clue an app COULD do that to my CPU & thinking that hogging up was the cause for my iMac's troubles i googled it up in a panic, read as much as i could on the subject & as far as i could gather, it seems Handbrake IS designed/supposed to use up as much as it possibly can/is allowed depending on whatever else is going on in the computer + CPU capacity & so on ?

     

      having said that i checked what version i'm running & yes, it is the latest ( Version 0.9.8 x86_64 (2012071800) + i sure hope this ISN'T due to an imcompatibility between M.Lion & Handbrake, i just LOVE Handbrake since it has helped me condense SO EASILY most of my DVD's saving me having to buy a gazillion GB to store the resulting files..

      plus to think it's a free app, how is THAT even possible ? that to me IS mind boggling....

     

      as far as your comment on the possibility of my HD going bad, i confess there are MANY other things i WOULD prefer BUT at this point, if i consider ALL THE TIME & FRUSTRATION this weird behaviour has brought into my life, i think i would actually feel relieved if THAT was it - you know what i mean ?

      AT LEAST i would know WHY it behaves the way it does - the killer to me is NOT KNOWING nor being able to figure it out....

     

    finally what sort of app do you think would be THE app to use to determine if this is the case ?

     

      man, thank you SO much for all the effort you are devoting into helping me out - beleieve me when i say it is VERY APPRECIATED !

  • by nuno1959,

    nuno1959 nuno1959 Aug 22, 2012 2:24 PM in response to MadMacs0
    Level 1 (38 points)
    iLife
    Aug 22, 2012 2:24 PM in response to MadMacs0

    Hi MadMacs0

     

    OK - a couple of what i think are good news :

     

    i ran again the ppc command thing in Terminal, but this time i DIDN'T touch the computer, the result was this :

     

    Screen Shot 2012-08-22 at 10.02.41 PM.png

     

       i actually superimposed two windows there for ease of uploading & viewing

     

       it took a while to do it's thing but as you can see i DID have this app ( Max, a audio app..) & i launched AppZapper to get rid of it. then Secure Empty Trash & it started deleting 900 & some files - i never thought such a small app could have so many files - it deleted them in a couple of minutes, no hanging, nothing !

     

       before this i roamed the Forum looking up threads that might be related to my issues & came upon this thread where someone suggested disabling Java ( not JavaScript..) in Safari, i did & even if i can't tell it has brought any advantage, i have browsed the web a bit & didn't notice anything out of the ordinary so...i think i'll leave it this way for the time being just to ascertain excatly what the difference is..

     

    Screen Shot 2012-08-22 at 10.14.38 PM.jpg

     

      meanwhile i have looked up several ''drive apps'' but haven't made up my mind about any of them yet - i have to do some more reading before i decide...

     

      now let's see how my iMac behaves - i'll post back any changes, be it for better or otherwise..

     

      cheers

     

      Nuno

  • by MadMacs0,Solvedanswer

    MadMacs0 MadMacs0 Aug 22, 2012 6:17 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 22, 2012 6:17 PM in response to nuno1959

    Been quite busy with my day job, but have some time now while watching the news.

    nuno1959 wrote:

     

      ...as far as your comment on the possibility of my HD going bad, i confess there are MANY other things i WOULD prefer BUT at this point, if i consider ALL THE TIME & FRUSTRATION this weird behaviour has brought into my life, i think i would actually feel relieved if THAT was it - you know what i mean ?

      AT LEAST i would know WHY it behaves the way it does - the killer to me is NOT KNOWING nor being able to figure it out....

     

    finally what sort of app do you think would be THE app to use to determine if this is the case ?

    There are only two or three that do a good job of checking S.M.A.R.T. status, IMHO. Even though Disk Utility and many others claim to do so, they only check the first level of information and won't see that a hard drive is in declining health.

     

    The first is SMART Utility for Mac with a trial version and it's $25 shareware.

     

    The second is SoftRAID with a thirty day trial and $129. This is the one that predicted my last failure very early in the demo period. Since I don't need any of the RAID features I uninstalled it after replacing the drive. I think they could make good money if they just spun off the health monitoring portion at a lower cost.

     

    The last one that I have recent experience with is TechTool Pro 6 which would set you back $100. They have made some progress with their S.M.A.R.T. testing and it also can do a surface scan. It's what alerted me to my last problem, but wasn't quite enough to convince me that a relatively new drive was going bad, so I installed the SoftRAID demo. Full Disclosure, I am a long time compensated beta tester.

     

    I also use Drive Genius 2 (which recovered a corrupt directory a few years back when nothing else would) but have not yet tried version 3 so I can't comment on whether their S.M.A.R.T. testing has improved or not.

     

    I keep the free version of SMARTReporter running all the time (now 3.99€ at the AppStore, but the free version is still available) which would probably told me eventually that I had a problem, but it might have been too late.

     

    Hope that helps.

  • by MadMacs0,

    MadMacs0 MadMacs0 Aug 22, 2012 6:32 PM in response to nuno1959
    Level 5 (4,801 points)
    Aug 22, 2012 6:32 PM in response to nuno1959

    nuno1959 wrote:

     

    Hi MadMacs0

     

    OK - a couple of what i think are good news :

     

    i ran again the ppc command thing in Terminal, but this time i DIDN'T touch the computer, the result was this :

     

       it took a while to do it's thing but as you can see i DID have this app ( Max, a audio app..) & i launched AppZapper to get rid of it. then Secure Empty Trash & it started deleting 900 & some files - i never thought such a small app could have so many files - it deleted them in a couple of minutes, no hanging, nothing !

    I expected to see a bit more based on feedback from other users. Your's is quite clean and that app could not have caused the problems you are seeing, but happy you got some hard drive space back from it.

    before this i roamed the Forum looking up threads that might be related to my issues & came upon this thread where someone suggested disabling Java ( not JavaScript..) in Safari, i did & even if i can't tell it has brought any advantage, i have browsed the web a bit & didn't notice anything out of the ordinary so...i think i'll leave it this way for the time being just to ascertain excatly what the difference is..

    Yes, having Java off is important from a security standpoint. Be sure you disable it with all your browsers. Even though you have the latest version of Java installed, there are already known vulnerabilities that Oracle is working to patch, so sooner or later the malware folks will have figured out a way to exploit it.  Very few sites use it (a few financial institutions and some proprietary Company internal software) so you probably won't need it. Mines been off for over a year and I can only recall turning it on once. Any site that requires it will let you know.

    meanwhile i have looked up several ''drive apps'' but haven't made up my mind about any of them yet - i have to do some more reading before i decide...

    Hopefully my previous post will help with that.

     

    I'm surprised that none of the other troubleshooters have shown up to help. I stumbled in when I saw ClamXav mentioned earlier (which is my specialty). Although I try to keep up on current OS issues, I'm not running them yet, which means I can't double-check all my recommendations.

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