Yeah, go ahead and delete the Render Files in the Projects folder. When you Share the project (render it out for disc, etc.) it puts those files in the Shared Items folder inside the Project folder. The Render Files is simply for playing back the timeline in FCP X.
I have found that the unrendered footage playing from the SSD is faster and more responsive in my timeline than the rendered stuff located on a project folder on a slower drive.
Of course, you can put the project itself on the SSD with the media and this is optimal if your SSD has enough hard drive space. You have to keep an eye on the remaining space on that SSD, though, because project folders get bigger over time as it renders the thumbs, Shared items, etc. It's not like a simple XML project file we are all used to with other applications (like Motion). So if you Share a project as Blu-ray, there is a 24 gig folder of that (for a 2 hour project). If you Share it as a DVD, you got another 4 gigs, etc. It all builds up.
Because of that, I put my project file on my main hard drive with a ton of space and then my events on the SSD and keep background render off. The only footage that is playing off the slower main drive is the stuff I keyed that is rendered, but it's not much because my project isn't a lot of keying.