Thanks. Below is the info you requested. I repalced my user-name in the log with "USERNAME". I also deleted many exactly the same error messages for easy readability.
I moved all the media and picture files out of the home directory. I see that Spotlight is now indexing. But in console I now see hundreds of messages like below:
4/17/13 6:02:38.000 PM kernel[0]: fsevents: watcher falling behind: Memeod (pid: 63) rd: 443 wr: 443 q_size: 1024 flags: 0x1
With mdworker Filter:
================
4/17/13 4:26:21.771 PM mdworker[746]: Unable to talk to lsboxd
4/17/13 4:26:26.128 PM sandboxd[747]: ([746]) mdworker(746) deny mach-lookup com.apple.ls.boxd
4/17/13 4:27:33.474 PM mdworker[755]: Unable to talk to lsboxd
4/17/13 4:27:33.547 PM sandboxd[756]: ([755]) mdworker(755) deny mach-lookup com.apple.ls.boxd
4/17/13 4:27:55.055 PM mdworker[760]: zip importer encountered an error (3) scanning "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/157722.app (2).zip".
4/17/13 4:27:55.061 PM mdworker[760]: zip importer encountered an error (3) scanning "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/157722.app.zip".
4/17/13 4:28:03.398 PM mdworker[760]: Unable to talk to lsboxd
4/17/13 4:30:28.489 PM mdworker[806]: Unable to talk to lsboxd
4/17/13 4:30:28.494 PM mdworker[808]: Unable to talk to lsboxd
4/17/13 4:30:28.623 PM sandboxd[809]: ([806]) mdworker(806) deny mach-lookup com.apple.ls.boxd
4/17/13 4:30:28.627 PM sandboxd[809]: ([808]) mdworker(808) deny mach-lookup com.apple.ls.boxd
4/17/13 4:33:03.023 PM mdworker32[845]: LayOut MetadataScanner failed due to exception "NSInvalidArgumentException", caused by "launch path not accessible"
4/17/13 4:33:03.024 PM mdworker32[845]: LayOut MetadataScanner failed on Zip archive expansion
4/17/13 4:33:27.422 PM mdworker32[851]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:33:27.513 PM mdworker32[851]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:33:28.431 PM sandboxd[853]: ([851]) mdworker32(851) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 73503)
4/17/13 4:33:33.862 PM mdworker32[854]: LayOut MetadataScanner failed due to exception "NSInvalidArgumentException", caused by "launch path not accessible"
4/17/13 4:33:33.863 PM mdworker32[854]: LayOut MetadataScanner failed on Zip archive expansion
4/17/13 4:33:33.876 PM mdworker32[854]: LayOut MetadataScanner failed due to exception "NSInvalidArgumentException", caused by "launch path not accessible"
4/17/13 4:33:41.815 PM mdworker32[859]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:33:41.827 PM mdworker32[859]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:33:42.036 PM sandboxd[853]: ([859]) mdworker32(859) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 76945)
4/17/13 4:38:35.132 PM mdworker[889]: Unable to talk to lsboxd
4/17/13 4:38:35.339 PM mdworker[888]: Unable to talk to lsboxd
4/17/13 4:40:47.469 PM mdworker32[909]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:40:47.683 PM mdworker32[909]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:40:49.951 PM sandboxd[910]: ([909]) mdworker32(909) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.slideshow plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 230350)
4/17/13 4:41:18.056 PM mdworker32[914]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:41:18.076 PM mdworker32[914]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:41:18.323 PM sandboxd[915]: ([914]) mdworker32(914) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 277708)
4/17/13 4:41:50.494 PM mdworker[893]: (Normal) Import: import uti:org.openxmlformats.wordprocessingml.document plugin:/Library/Spotlight/RichText.mdimporter exceeded cpu use limits (12) after 16001 milliseconds - find suspect file using: sudo mdutil -t 281979
4/17/13 4:42:11.748 PM mdworker[921]: (Normal) Import: import uti:org.openxmlformats.wordprocessingml.document plugin:/Library/Spotlight/RichText.mdimporter exceeded cpu use limits (12) after 15999 milliseconds - find suspect file using: sudo mdutil -t 281979
4/17/13 4:43:04.958 PM mdworker32[932]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:43:04.977 PM mdworker32[932]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:43:05.204 PM sandboxd[935]: ([932]) mdworker32(932) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation.macroenabled plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 301158)
4/17/13 4:43:55.521 PM mdworker[924]: iCal.mdimporter: could not find component keys: /Volumes/HD2/USERNAME/Library/Application Support/iCal/Sources/054AA375-83C2-43E1-9F5C-956FF18AEC9F.calendar/corestorage. ics
4/17/13 4:44:51.252 PM sandboxd[953]: ([952]) mdworker(952) deny file-write-owner /Volumes/HD2/USERNAME/Library/Containers/com.apple.Notes/Data/Library/Notes/Not esV1.storedata-wal (import fstype:hfs fsflag:4809000 flags:40000005F diag:0 uti:com.apple.notes.externalrecord plugin:/Library/Spotlight/Notes.mdimporter - find suspect file using: sudo mdutil -t 532551)
4/17/13 4:44:51.259 PM sandboxd[953]: ([952]) mdworker(952) deny file-write-owner /Volumes/HD2/USERNAME/Library/Containers/com.apple.Notes/Data/Library/Notes/Not esV1.storedata-shm (import fstype:hfs fsflag:4809000 flags:40000005F diag:0 uti:com.apple.notes.externalrecord plugin:/Library/Spotlight/Notes.mdimporter - find suspect file using: sudo mdutil -t 532551)
4/17/13 4:45:11.020 PM mdworker[924]: FontImporter: Validation failed - "/Volumes/HD2/USERNAME/Library/Fonts/MT Extra".
4/17/13 4:45:11.020 PM mdworker[924]: FontImporter: Validation Result - "(
kATSFontTestSeverityInformation,
kATSFontTestSeverityTechnicalError,
kATSFontTestSeverityMajorError,
kATSFontTestSeverityFatalError,
kATSFontTestSeverityMinorError
)".
4/17/13 4:45:20.647 PM mdworker32[967]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:45:20.666 PM mdworker32[967]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:45:20.905 PM sandboxd[968]: ([967]) mdworker32(967) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 551208)
4/17/13 4:46:20.561 PM mdworker[976]: Unable to talk to lsboxd
4/17/13 4:46:20.565 PM mdworker[975]: Unable to talk to lsboxd
4/17/13 4:46:21.468 PM sandboxd[978]: ([976]) mdworker(976) deny mach-lookup com.apple.ls.boxd
4/17/13 4:46:21.518 PM sandboxd[978]: ([975]) mdworker(975) deny mach-lookup com.apple.ls.boxd
4/17/13 4:47:32.624 PM mdworker[982]: (Normal) Import: import uti:com.apple.mail.emlx plugin:/Library/Spotlight/Mail.mdimporter exceeded cpu use limits (24) after 44000 milliseconds - find suspect file using: sudo mdutil -t 553373
4/17/13 4:48:32.325 PM mdworker[997]: Unable to talk to lsboxd
4/17/13 4:48:32.329 PM mdworker[995]: Unable to talk to lsboxd
4/17/13 4:48:32.376 PM mdworker32[994]: CGSGetDisplayBounds: Invalid display 0x00000000
4/17/13 4:48:32.388 PM mdworker32[994]: bootstrap_look_up2 failed with 0x44c
4/17/13 4:48:32.479 PM sandboxd[999]: ([997]) mdworker(997) deny mach-lookup com.apple.ls.boxd
4/17/13 4:48:32.487 PM sandboxd[999]: ([995]) mdworker(995) deny mach-lookup com.apple.ls.boxd
4/17/13 4:48:32.680 PM sandboxd[999]: ([994]) mdworker32(994) deny mach-lookup com.apple.PowerManagement.control (import fstype:hfs fsflag:4809000 flags:40000005E diag:0 uti:org.openxmlformats.presentationml.presentation plugin:/Library/Spotlight/Microsoft Office.mdimporter - find suspect file using: sudo mdutil -t 553651)
4/17/13 4:49:41.880 PM mdworker[993]: zip importer encountered an error (2) scanning "/Volumes/HD2/USERNAME/Music/iTunes/iTunes Media/Mobile Applications/com.tis.iCanPrint.zip".
4/17/13 4:49:41.887 PM mdworker[993]: zip importer encountered an error (2) scanning "/Volumes/HD2/USERNAME/Music/iTunes/iTunes Media/Mobile Applications/com.vitotechnology.StarWalk.zip".
4/17/13 4:51:05.312 PM com.apple.launchd.peruser.501[467]: (com.apple.mdworker.shared.04000000-0000-0000-0000-000000000000[990]) Exited: Killed: 9
4/17/13 4:54:10.700 PM mdworker[1100]: FontImporter: Validation failed - "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/android-sdk-macosx/platforms/android-13/data/fonts/DroidSansFal lback.ttf".
4/17/13 4:54:10.700 PM mdworker[1100]: FontImporter: Validation Result - "(
kATSFontTestSeverityMinorError,
kATSFontTestSeverityInformation,
kATSFontTestSeverityTechnicalError,
kATSFontTestSeverityFatalError
)".
4/17/13 4:56:33.547 PM mdworker[1124]: Unable to talk to lsboxd
4/17/13 4:56:34.536 PM sandboxd[1129]: ([1126]) mdworker(1126) deny mach-lookup com.apple.ls.boxd
4/17/13 4:56:34.546 PM sandboxd[1129]: ([1124]) mdworker(1124) deny mach-lookup com.apple.ls.boxd
4/17/13 4:57:05.010 PM mdworker[1100]: FontImporter: Validation failed - "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/android-sdk-macosx 2/platforms/android-12/data/fonts/DroidSansFallback.ttf".
4/17/13 4:57:05.011 PM mdworker[1100]: FontImporter: Validation Result - "(
kATSFontTestSeverityMinorError,
kATSFontTestSeverityInformation,
kATSFontTestSeverityTechnicalError,
kATSFontTestSeverityFatalError
)".
4/17/13 5:00:43.531 PM mdworker[1171]: Unable to talk to lsboxd
4/17/13 5:00:43.534 PM mdworker[1172]: Unable to talk to lsboxd
4/17/13 5:00:43.618 PM sandboxd[1176]: ([1171]) mdworker(1171) deny mach-lookup com.apple.ls.boxd
4/17/13 5:00:43.626 PM sandboxd[1176]: ([1172]) mdworker(1172) deny mach-lookup com.apple.ls.boxd
4/17/13 5:02:16.474 PM mdworker[1100]: FontImporter: Validation failed - "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/android-sdk-macosx-1/platforms/android-15/data/fonts/DroidSansF allback.ttf".
4/17/13 5:02:16.475 PM mdworker[1100]: FontImporter: Validation Result - "(
kATSFontTestSeverityMinorError,
kATSFontTestSeverityInformation,
kATSFontTestSeverityTechnicalError,
kATSFontTestSeverityFatalError
)".
4/17/13 5:02:16.879 PM mdworker[1100]: FontImporter: Validation failed - "/Volumes/MyBook USERNAME Mac/USERNAME Semi useful files/Downloads/android-sdk-macosx-1/platforms/android-15/data/fonts/DroidSansF allbackFull.ttf".
4/17/13 5:02:16.879 PM mdworker[1100]: FontImporter: Validation Result - "(
kATSFontTestSeverityMinorError,
kATSFontTestSeverityInformation,
kATSFontTestSeverityTechnicalError,
kATSFontTestSeverityFatalError
)".
With MDS Filter:
================
4/17/13 3:31:35.469 PM Terminal[8514]: Could not launch query, mds might have an issue
4/17/13 3:31:37.811 PM com.apple.launchd[1]: (com.apple.metadata.mds[8567]) Job appears to have crashed: Segmentation fault: 11
4/17/13 3:31:37.811 PM com.apple.launchd[1]: (com.apple.metadata.mds) Throttling respawn: Will start in 10 seconds
4/17/13 3:31:37.889 PM ReportCrash[8560]: Saved crash report for mds[8567] version 707.5 to /Library/Logs/DiagnosticReports/mds_2013-04-17-153137_USERNAMEs-Mac-mini.crash
4/17/13 3:31:48.138 PM com.apple.launchd[1]: (com.apple.metadata.mds[8571]) Job appears to have crashed: Segmentation fault: 11
4/17/13 3:31:48.138 PM com.apple.launchd[1]: (com.apple.metadata.mds) Throttling respawn: Will start in 10 seconds
4/17/13 3:31:48.198 PM ReportCrash[8560]: Saved crash report for mds[8571] version 707.5 to /Library/Logs/DiagnosticReports/mds_2013-04-17-153148_USERNAMEs-Mac-mini.crash
4/17/13 3:31:58.495 PM com.apple.launchd[1]: (com.apple.metadata.mds[8574]) Job appears to have crashed: Segmentation fault: 11
4/17/13 3:31:58.495 PM com.apple.launchd[1]: (com.apple.metadata.mds) Throttling respawn: Will start in 10 seconds
4/17/13 3:31:58.588 PM ReportCrash[8575]: Saved crash report for mds[8574] version 707.5 to /Library/Logs/DiagnosticReports/mds_2013-04-17-153158_USERNAMEs-Mac-mini.crash
4/17/13 3:32:08.825 PM com.apple.launchd[1]: (com.apple.metadata.mds[8579]) Job appears to have crashed: Segmentation fault: 11
4/17/13 3:32:08.825 PM com.apple.launchd[1]: (com.apple.metadata.mds) Throttling respawn: Will start in 10 seconds
<MANY exactly the same messages like the above REMOVED for easy readability>
4/17/13 3:44:43.763 PM ReportCrash[8774]: Saved crash report for mds[8780] version 707.5 to /Library/Logs/DiagnosticReports/mds_2013-04-17-154443_USERNAMEs-Mac-mini.crash
4/17/13 4:10:25.173 PM mds[38]: (Normal) FMW: FMW 0 0
4/17/13 4:10:36.173 PM mds[38]: (Warning) Server: No stores registered for metascope "kMDQueryScopeComputer"
4/17/13 4:15:49.788 PM mds[38]: Unable to talk to lsboxd
4/17/13 5:34:51.874 PM mds[38]: (Normal) FMW: FMW 0 0
4/17/13 5:38:24.666 PM mds[38]: Unable to talk to lsboxd
4/17/13 5:47:06.852 PM DictationIM[655]: Exception in proxy <IMKTextInput> respondsToSelector: inputSessionDoneSleep
name = NSPortTimeoutException
reason = connection timeout: did not receive reply
userInfo = (null)
(
0 CoreFoundation 0x00007fff895bcb06 __exceptionPreprocess + 198
1 libobjc.A.dylib 0x00007fff90feb3f0 objc_exception_throw + 43
2 CoreFoundation 0x00007fff895bc8dc +[NSException raise:format:] + 204
3 Foundation 0x00007fff95752c99 -[NSConnection sendInvocation:internal:] + 3209
4 Foundation 0x00007fff9574c958 -[NSProxy respondsToSelector:] + 105
5 InputMethodKit 0x0000000101fc837d -[IPMDServerClientWrapper _clientTryRespondsToSelector:] + 74
6 InputMethodKit 0x0000000101fcce4e -[IPMDServerClientWrapper inputSessionDoneSleep] + 61
7 Foundation 0x00007fff95719af3 __NSFireTimer + 96
8 CoreFoundation 0x00007fff89579804 __CFRUNLOOP_IS_CALLING_OUT_TO_A_TIMER_CALLBACK_FUNCTION__ + 20
9 CoreFoundation 0x00007fff8957931d __CFRunLoopDoTimer + 557
10 CoreFoundation 0x00007fff8955ead9 __CFRunLoopRun + 1529
11 CoreFoundation 0x00007fff8955e0e2 CFRunLoopRunSpecific + 290
12 HIToolbox 0x00007fff94d1eeb4 RunCurrentEventLoopInMode + 209
13 HIToolbox 0x00007fff94d1ec52 ReceiveNextEventCommon + 356
14 HIToolbox 0x00007fff94d1eae3 BlockUntilNextEventMatchingListInMode + 62
15 AppKit 0x00007fff936c3563 _DPSNextEvent + 685
16 AppKit 0x00007fff936c2e22 -[NSApplication nextEventMatchingMask:untilDate:inMode:dequeue:] + 128
17 AppKit 0x00007fff936ba1d3 -[NSApplication run] + 517
18 DictationIM 0x0000000101f9d7da DictationIM + 51162
19 libdyld.dylib 0x00007fff8e4347e1 start + 0
20 ??? 0x0000000000000001 0x0 + 1
)