iPad iBooks randomly shows black boxes on PDF pages, quarter/half of page
I have scanned some books with the Fujitsu SnapScan S510 and then used Adobe Acrobat Professional 8.2.6 for OCR. The result is perfect for me. But with my iPad Mini every now and then one quarter of the page or one half (vertical/horizontal) of the page turns completely black. If I zoom a bit I might see the content or if I close iBooks and start over that page might be just fine but then every 1/10 pages turns partially black again.
What is going on? I have tried other iPad PDF readers but this happens only with iBooks which I would like to use because it is fast and links clickable.
I visited a guru at Chicago Apple Store end she thought "it is a software glitch". That did not help me much.
Anyone know anything more or what to do. Very annoying.
iPad 2, iOS 5, OSX10.7.2, iTunes10.5, Aperture3.2