rccharles,
Thanks for the info, but I have found several kiosk programs which lock down the internet and ipad so that you limit access to particular programs or websites, etc. I am also a member of the developer center for iOS, mac and Safari desktop.
The problem I am having is within the iframes of mobile Safari, and it not being able to scroll properly. This is a known bug or defect that has been reported numerous times, and if you do a internet search you can see all sorts of people complaining and looking for workarounds to the issue.
What I was hoping to get from here is alternate ways of doing what I want to do. Either by making Puffin respond to a whitelist of allowable websites, or a way to make mobile safari use adobe to read the webpages. If I use Opera Mini, and click on the PDF file it open up in mobile safari and I am able to scroll through the documents. If I use just mobile safari, they open but will not scroll.
I do thank you for the response, but your solutions have already been tried.