trying to restoring a late 2013 macbook pro from a 2010 macbook pro

Hi I have problems with my 13"retina macbook pro from late 2013.There is something on it that makes it 4 times slower in boot up than the other two one from 2009 and 20010 all are running 10.9.5, so I thought I would clone one of them that has all the programs I need on it .

Having cloned it with ccc to a external hard disc and testing to see that it boots, witch it dose in the machine it was cloned on, but when I tried to boot from it on the retina it will not.

Any one who could shed some light on why this is so would be very welcome.

Thanks

Chrisus