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Oct 7, 2015 11:33 AM in response to mme786by ahinalu,Far from expert, but this worked for me, but unfortunately also stopped my iphone from making a sound alert when messages would come in. But this might work for you.
Go to Syst preferences > Notifications > Then drag the app you don't want alerting to the "Not in notification center" box. This will stop all notifications from that app showing up on your desktop. You'll still get the emails, but it won't alert you on your computer.