git invalid developer path

Hi,

After the upgrade to El Capitan I am getting the following error in Git

MacBook-Pro:xekmypic dlsa$ xcode-select -p

/Applications/Xcode.app/Contents/Developer

MacBook-Pro:xekmypic dlsa$ git push

Password:

xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun

fatal: Could not read from remote repository.

Please make sure you have the correct access rights

and the repository exists.

MacBook-Pro:xekmypic dlsa$

As can be seen from the output of the first command the active developer path reported by xcode-select is not the same as reported by the git binary.

I am running the git binary from the git download site and not the git that already comes with OS X. I ran the following command to override it :

MacBook-Pro:xekmypic dlsa$ alias git=/usr/local/git/bin/git

MacBook-Pro:xekmypic dlsa$ git --version

git version 2.6.4

MacBook-Pro:xekmypic dlsa$

I already have Xcode 7.2 and the command line developer tools. (it wont let me reinstalling it, the command xcode-select --install will tell me that the tools are already installed)

How can I fix this issue ?

Thanks