Time to erase & Install? Safari slow, thermo error messages Plus more
I have been having difficulty with Safari and odd error messages for months, but it has become worse. Safari is slow to open at times, and it will stall out when I click on link on a web page. When it stalls out for a while, the messages about keychain show up repeatedly along with a message about the window. I have been unable to pinpoint the keychain message anywhere. Today is the first time I have seen Thermo Pressure messages with Safari, but I have started seeing them scattered through the console in the last few days. Today after Safari finally loaded, I noticed that Mail had disappeared from the Dock. This has happened a few times in the last few months. I created a new admin and using Safari worked fine. When I began to add in keychain to access iCloud, I began to see the keychain error show up again. I am at my wits end, but my fear is if I erase and install, that I will somehow bring back the corrupted files and be in the same mess after doing all the work of start over.
After I booted and had only clicked on the finder, I had 27 of these messages:
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
5/6/16 11:14:58.104 AM coreduetd[77]: Error -54 registering path /System/Library/CoreServices/CoreTypes.bundle
Then the kernel messages began with the first apple application and continued through all of the utility apps:
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Automator.app
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Automator.app
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Automator.app
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Automator.app
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Calculator.app
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /Applications/Calculator.app
Followed by15 of these
:
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) file-read-metadata /
And then:
5/6/16 11:14:58.000 AM kernel[0]: Sandbox: coreduetd(77) deny(1) mach-lookup com.apple.lsd.modifydb
5/6/16 11:14:58.108 AM coreduetd[77]: LaunchServices: disconnect event received for service com.apple.lsd.modifydb
5/6/16 11:14:59.548 AM lsd[332]: LaunchServices: Currently 0 installed placeholders: (
)
I started Safari and it did not load at once, but while it eventually loaded, these messages appeared:
5/6/16 11:15:01.374 AM Safari[532]: plugin com.agilebits.onepassword4.safariextensioncompanion invalidated
5/6/16 11:15:01.395 AM SafariExtensionCompanion[536]: host connection <NSXPCConnection: 0x7feb49f04e80> connection from pid 532 invalidated
5/6/16 11:15:02.096 AM com.apple.AddressBook.ContactsAccountsService[354]: [Accounts] Current connection, <NSXPCConnection: 0x7fda215104f0> connection from pid 399, doesn't have account access.
5/6/16 11:15:02.096 AM IMDPersistenceAgent[399]: [Accounts] Failed to update account with identifier 8C7BEBAA-E396-4BA7-A47C-A714DF496DC6, error: Error Domain=ABAddressBookErrorDomain Code=1002 "(null)"
5/6/16 11:15:02.886 AM Safari[532]: KeychainGetICDPStatus: keychain: -25300
5/6/16 11:15:02.886 AM Safari[532]: KeychainGetICDPStatus: status: off
5/6/16 11:15:05.543 AM Console[545]: Failed to connect (_consoleX) outlet from (NSApplication) to (ConsoleX): missing setter or instance variable
5/6/16 11:15:08.146 AM com.apple.CDScheduler[326]: SysAdmChk: Throttling activity execution. memFlags:0x0 thermalLevel:0x1
5/6/16 11:15:08.149 AM com.apple.CDScheduler[326]: SysAdmChk: Throttling activity execution. memFlags:0x0 thermalLevel:0x1
5/6/16 11:15:08.197 AM soagent[389]: Can't allocate SOHelper <SOMessageHelper: 0x7fd3932249a0> inside com.apple.soagent
5/6/16 11:15:08.000 AM kernel[0]: Sandbox: systemsoundserve(287) deny(1) file-read-data /private/var/root/Library/Preferences/ByHost/.GlobalPreferences.ACD5D7B3-4339-5 316-8535-0086B1D98CB8.plist
5/6/16 11:15:08.000 AM kernel[0]: Sandbox: systemsoundserve(287) deny(1) file-read-data /private/var/root/Library/Preferences/.GlobalPreferences.plist
5/6/16 11:15:11.575 AM launchd[1]: BUG in libdispatch: 15E65 - 1718 - 0x0
5/6/16 11:15:11.575 AM networkd[177]: BUG in libdispatch: 15E65 - 1718 - 0x0
5/6/16 11:15:11.756 AM imagent[381]: [Warning] IMDFileTransferCenter: could not set kMDItemWhereFroms on file /var/folders/z2/nxmxtq2d1lbf2pv_7rdvxgt40000gn/T/71149BE5-3BA4-477B-B388-D789DA FBBD25/IMG_4421.MOV.mov
5/6/16 11:15:11.756 AM imagent[381]: [Warning] IMDFileTransferCenter: could not set kMDItemWhereFroms on file /var/folders/z2/nxmxtq2d1lbf2pv_7rdvxgt40000gn/T/71149BE5-3BA4-477B-B388-D789DA FBBD25/IMG_4421.MOV.mov
5/6/16 11:15:11.757 AM imagent[381]: [Warning] IMDFileTransferCenter: could not set kMDItemDownloadedDate on file /var/folders/z2/nxmxtq2d1lbf2pv_7rdvxgt40000gn/T/71149BE5-3BA4-477B-B388-D789DA FBBD25/IMG_4421.MOV.mov
5/6/16 11:15:11.757 AM imagent[381]: [Warning] IMDFileTransferCenter: could not set kMDItemDownloadedDate on file /var/folders/z2/nxmxtq2d1lbf2pv_7rdvxgt40000gn/T/71149BE5-3BA4-477B-B388-D789DA FBBD25/IMG_4421.MOV.mov
5/6/16 11:15:11.940 AM com.apple.spotlight.IndexAgent[522]: [com.apple.corespotlight.log] Not allowed to pass in bundle ID
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [com.apple.corespotlight.log.index] Finished "index items"(6) with error:Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: indexing searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: indexing searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.941 AM com.apple.spotlight.IndexAgent[522]: [com.apple.corespotlight.log] Not allowed to pass in bundle ID
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [com.apple.corespotlight.log.index] Finished "index items"(8) with error:Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: deleting message for searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.941 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: deleting message for searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.960 AM com.apple.spotlight.IndexAgent[522]: [com.apple.corespotlight.log] Not allowed to pass in bundle ID
5/6/16 11:15:11.960 AM IMDPersistenceAgent[399]: [com.apple.corespotlight.log.index] Finished "index items"(10) with error:Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.960 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: indexing searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.960 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: indexing searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.960 AM com.apple.spotlight.IndexAgent[522]: [com.apple.corespotlight.log] Not allowed to pass in bundle ID
5/6/16 11:15:11.960 AM IMDPersistenceAgent[399]: [com.apple.corespotlight.log.index] Finished "index items"(12) with error:Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.961 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: deleting message for searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:11.961 AM IMDPersistenceAgent[399]: [Warning] IMDChatAddMessageToSpotlight: deleting message for searchable items failed with error Error Domain=CSIndexErrorDomain Code=-1003 "(null)"
5/6/16 11:15:12.300 AM apsd[84]: MessageTracer: load_domain_prefix_whitelist:120: Missing default whitelist file: /System/Library/PrivateFrameworks/CrashReporterSupport.framework/Resources/Subm itDiagInfo.default.domains
5/6/16 11:15:12.437 AM apsd[84]: MessageTracer: load_domain_prefix_whitelist:120: Missing default whitelist file: /System/Library/PrivateFrameworks/CrashReporterSupport.framework/Resources/Subm itDiagInfo.default.domains
5/6/16 11:15:13.157 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 2 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:13.187 AM SpotlightNetHelper[550]: CGSConnectionByID: 0 is not a valid connection ID.
5/6/16 11:15:13.187 AM SpotlightNetHelper[550]: Invalid Connection ID 0
5/6/16 11:15:13.321 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 13 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:13.543 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 18 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:13.543 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 17 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:13.543 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 19 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:13.544 AM Safari[532]: tcp_connection_tls_session_error_callback_imp 12 __tcp_connection_tls_session_callback_write_block_invoke.434 error 22
5/6/16 11:15:14.427 AM Safari[532]: Caching encoded userInfo to use until we are marked dirty again (UAUserActivity.m #1567)
5/6/16 11:15:14.427 AM Safari[532]: Caching encoded userInfo to use until we are marked dirty again (UAUserActivity.m #1567)
5/6/16 11:15:15.253 AM com.apple.CDScheduler[326]: Thermal pressure state: 0 Memory pressure state: 0
5/6/16 11:15:15.253 AM com.apple.CDScheduler[51]: Thermal pressure state: 0 Memory pressure state: 0
5/6/16 11:15:19.389 AM soagent[389]: Can't allocate SOHelper <SOMessageHelper: 0x7fd3961acd60> inside com.apple.soagent
5/6/16 11:15:19.408 AM soagent[389]: Can't allocate SOHelper <SOMessageHelper: 0x7fd396316ca0> inside com.apple.soagent
5/6/16 11:15:21.153 AM Safari[532]: KeychainGetICDPStatus: keychain: -25300
5/6/16 11:15:21.153 AM Safari[532]: KeychainGetICDPStatus: status: off
5/6/16 11:15:22.422 AM com.apple.CDScheduler[326]: Thermal pressure state: 1 Memory pressure state: 0
5/6/16 11:15:22.423 AM com.apple.CDScheduler[51]: Thermal pressure state: 1 Memory pressure state: 0
5/6/16 11:15:23.447 AM com.apple.CDScheduler[326]: Thermal pressure state: 0 Memory pressure state: 0
5/6/16 11:15:23.447 AM com.apple.CDScheduler[51]: Thermal pressure state: 0 Memory pressure state: 0
5/6/16 11:15:34.093 AM diagnostics_agent[386]: AutoSubmitPreference is 0
5/6/16 11:15:36.637 AM mds[69]: (DiskStore.Normal:1705) Starting health check...
During the process above, Mail disappeared from the Dock. I had not opened it yet.
I also have instances in Picabo when I am working on a photo book of clicking on an action to be done and nothing happens as if it had frozen, however, if I click elsewhere on the site, action takes place. I have not had thermo messages before with Safari.
In Safari extensions, I have 1Password, Translate, WOT, and uBlock enabled. I have Internet plugins enabled but not WebGL.
I also have a bunch the following messages as I work on Picabo and a photo book. I have deleted part of the personal names:
5/6/16 11:55:45.000 AM kernel[0]: Sandbox: com.apple.WebKit(676) deny(1) file-read-xattr /Users/Dot/Pictures/Jus Book/Chef/DSC_2164.jpg
5/6/16 11:55:45.000 AM kernel[0]: Sandbox: com.apple.WebKit(676) deny(1) file-read-xattr /Users/Do/Pictures/JustBook/Chef/DSC_2164.jpg
5/6/16 11:55:45.000 AM kernel[0]: Sandbox: com.apple.WebKit(676) deny(1) file-read-xattr /Users/Doct/Pictures/JBook/Chef/DSC_2166.jpg
5/6/16 11:55:45.000 AM kernel[0]: Sandbox: com.apple.WebKit(676) deny(1) file-read-xattr /Users/Docs/Pictures/Jus Book/Chef/DSC_2166.jpg
5/6/16 11:55:45.000 AM kernel[0]: Sandbox: com.apple.WebKit(676) deny(1) file-read-xattr /Users/Doc/Pictures/JustBook/Chef/DSC_2167.jpg
Here is Etre Check
Hardware Information:
MacBook Pro (Retina, 15-inch, Mid 2014)
MacBook Pro - model: MacBookPro11,3
1 2.8 GHz Intel Core i7 CPU: 4 cores
16 GB RAM
Video Information:
Intel Iris Pro - VRAM: (null)
NVIDIA GeForce GT 750M - VRAM: 2048 MB
Audio Plug-ins:
BluetoothAudioPlugIn: Version: 4.4.4
AirPlay: Version: 2.0
AppleAVBAudio: Version: 403.4
InstantOn: Version: Unknown
iSightAudio: Version: 7.7.3
System Software:
OS X 10.11.4 (15E65) - Uptime: 0 days 4:14:4
Disk Information:
APPLE SSD SM1024F disk0 : (1 TB)
EFI (disk0s1) <not mounted>: 209.7 MB
disk0s2 (disk0s2) <not mounted>: 999.7 GB
Recovery HD (disk0s3) <not mounted>: 650 MB
USB Information:
Apple Inc. Apple Internal Keyboard / Trackpad
Apple Inc. BRCM20702 Hub
Apple Inc. Bluetooth USB Host Controller
FireWire Information:
Thunderbolt Information:
Apple Inc. thunderbolt_bus
Kernel Extensions:
Problem System Launch Daemons:
[failed] com.apple.logd.plist
[loaded] org.postfix.newaliases.plist
Problem System Launch Agents:
Launch Daemons:
[loaded] com.adobe.ARMDC.Communicator.plist
[loaded] com.adobe.ARMDC.SMJobBlessHelper.plist
[loaded] com.adobe.fpsaud.plist
[loaded] com.rogueamoeba.instanton-agent.plist
Launch Agents:
[loaded] com.epson.esua.launcher.plist
User Launch Agents:
[loaded] com.c-command.SpamSieve.LaunchAgent.plist
[loaded] com.google.keystone.agent.plist
User Login Items:
iTunesHelper
Rogue Amoeba Schedule Helper
Audio Hijack 3 Schedule Helper
Dropbox
3rd Party Preference Panes:
Flash Player
Java
Internet Plug-ins:
AdobePDFViewer.plugin
AdobePDFViewerNPAPI.plugin
Default Browser.plugin
QuickTime Plugin.plugin
Flash Player.plugin
FlashPlayer-10.6.plugin
JavaAppletPlugin.plugin
PepperFlashPlayer.plugin
User Internet Plug-ins:
Bad Fonts:
None
Time Machine:
Skip System Files: NO
Auto backup: YES
Time Machine not configured!
Top Processes by CPU:
27% com.apple.Safari.SafeBrowsing.Service
17% syncdefaultsd
7% Console
7% LocationMenu
5% com.apple.iCloudHelper
2% WindowServer
2% EtreCheck
1% launchd
1% launchservicesd
1% softwareupdate_notify_agent
Top Processes by Memory:
3.46 GB Photos
508 MB softwareupdated
426 MB Preview
360 MB WindowServer
344 MB Console
308 MB Safari
279 MB Finder
262 MB soagent
246 MB callservicesd
233 MB com.apple.WebKit.WebContent
Virtual Memory Statistics:
1.59 GB Free RAM
8.23 GB Active RAM
4.56 GB Inactive RAM
1.61 GB Wired RAM
2.63 GB Page-ins
12 KB Page-outs
Any suggestions will be appreciated. The only other option I see is to erase, install, and totally re-create all iCloud and keychain data and using none of my keychain information currently being used.
Thanks
MacBook Pro with Retina display, OS X El Capitan (10.11.3), 16GB RAM, 1TB SSD