I also have this issue on a 2017 MacBook Pro 13"
The flickering occurs when Automatic Brightness changes how bright the display is.
I can enforce the effect by putting my hand over the front camera which makes the system dim the display. It flickers while dimming and also while getting brighter again. Disabling the feature is not a solution for me, as I like to use this feature And it saves battery. Can be quite annoying whilst working in an environment where the light changes.
I cannot confirm this was not a problem before Mojave 10.14.1as I have just received the Notebook and performed a full clean install via USB. The PRAM and SMC reset was done before the fresh install and I tried them both again to fix this problem. Nothing helped. I do not have the issue with Mojave 10.14.1 on my older 2013 MacBook Pro. Hope Apple will fix this within the next Mojave Update. (Please?)