Many of the iBooks, at least the earlier iBook G3, have similar uneven illumination problems--I've got one on the workbench right now for other problems--so getting an iBook wouldn't necessarily have been the solution, though I don't recall whether I've seen this problem with the iBook G4. Also keep in mind that some people find that even if their iBook or Powerbook doesn't display these problems right away, the problem sometimes develops over time, so it's not really possible to tell if the newer models are immune to this problem, even if they don't have it right now. At least with your Powerbook, you're lucky enough to have one where the illumination evens out after the Powerbook has been on for a little while.
As far as your battery not charging beyond 99%: your battery's 99% might be better than other people's 100%, in terms of how long it allows your Powerbook to run. If it runs for at least an hour and a half, or two hours, from this battery, without your having to dim the screen, run in reduced speed mode, etc., that's about average.
I know after spending some big bucks, we'd want these products to work without flaws like these, but unless the problem is a real deal-breaker, sometimes that's the luck of the draw. But that doesn't mean we shouldn't keep asking Apple to be more consistent in their quality control.