Justin Nightingale...
It much depends on either counterparts, the built in IDE Controler or the FW Bridge. Next kicks in the other parameters such as HD specs and so on.
Now the IDE bus is more than likely shared with the Optical Drive on a Mac mini. Internal 2.5" form factor HD do not seem as fast as the 3.5" HDs. As you may see what I am driving at, there is some trivial bottlenecks here.
Next is that FW is processor direct, so it can cut out some of the bottlenecks as long as the 3.5" HD is concerned. Dropping down to a 2.5" HD reduces any speed advantages again.
So my conclusion as long as a Good FW based on an IDE 3.5" HD it should the tops of the speed race. Next probably would be a near toss up but more favorable FW /2.5".
