So will my Apple Pencil 2 work with my iPad Pro 12.9 4th generation?

yes

Apple Pencil compatibility

Find out which Apple Pencil works with which iPad.

Apple Pencil (2nd generation)

You can use Apple Pencil (2nd generation) with these iPad models: 

• iPad Pro 12.9-inch (3rd generation) and later
• iPad Pro 11-inch (1st generation) and later

Apple Pencil (1st generation)

You can use Apple Pencil (1st generation) with these iPad models:

• iPad Pro 12.9-inch (1st or 2nd generation)
• iPad Pro 10.5-inch
• iPad Pro 9.7-inch
• iPad Air (3rd generation)
• iPad (7th generation)
• iPad (6th generation)
• iPad mini (5th generation)

Not sure which iPad you have? Identify your iPad model.