When I got in from work I tried what you suggested. It is doing again now many of the things it did the first time. It seems to have wiped and rebooted the phone, and now is downloading settings, contacts, and apps. The visible part of this in the iTunes window was very short. I saw activity in the upper middle bar as you mentioned, in 3 phases that went by in mere seconds. I had a message on the phone itself that the initial setup was complete, and that apps would continue downloading "in the background." A good many of the apps are doing what I refer to as "clock face" where the hand sweeps around the circle showing they are downloading...again. And, some apps I had downloaded this afternoon are gone and will need to be downloaded again.
All this to say, it would seem that it did all of this the first time. I just wish there was a better way of knowing that the job was complete. It really left me in doubt.
Thanks again, Lawrence! Your help has been invaluable and I feel like I'm reaching the end of this process successfully.