There always are changes as software evolves. I have never made a time lapse movie with the older versions. So I don’t know whether any of the changes are causing the issues that you are seeing.
Time lapse video can involve thousands and potentially more photos. That can overly stress the software and might cause some lack of smoothness. This also can happen if you have insufficient applicaton space for iMovie to function efficiently. A slower CPU might also cause it. Possibly also the issue may be confined to just this one project, and may not occur if you place your media in a newly created project. Thus it takes some trouble shooting and experimentation to find a solution, if one exists.
— Rich