Hi ejackson2,
It sounds like you aren't currently view your All Inboxes folder. Here's some information from the Organize email in mailboxes on iPad - Apple Support you may find helpful:
"You can choose which mailboxes to view, reorder your mailboxes, create new ones, or rename or delete mailboxes. (Some mailboxes can’t be changed.)
To organize your mailboxes, tap
in the upper-left corner, tap Edit, then do any of the following:
- View mailboxes: Select the checkboxes next to the mailboxes you want to include in the mailboxes list.
- Reorder mailboxes: Touch and hold
next to a mailbox until it lifts up, then drag it to the new position. - Create a new mailbox: Tap New Mailbox in the lower-right corner, then follow the onscreen instructions.
- Rename a mailbox: Tap the mailbox, then tap the title. Delete the name, then enter a new name.
- Delete a mailbox: Tap the mailbox, then tap Delete Mailbox."
We hope this takes care of things for you.
Cheers.