Not sure why I am even taking the additional time.Guess because thats what we do in IT. And hopefully someone else may benefit from this.
Root cause? my original statement "typically the issues come from the update process itself, or a hung app or open app when the update starts."
Particular app? exchange email or corrupt settings that did not carry over during the update process. WhatsApp , Facebook, any GPS type apps hung up
Whose code is spinning the processor so hard that the iPhone stays abnormally warm? Again typical symptom of corrupt email account . Why? because if the email fired off during the update process it could be hung up trying to get an ACK back from the server.
Again just providing this information. Do with it what you want. Believe it or dont. Try it or live with your issue.
Sbailey,
Are you an Apple Employee? What facts are backing up your statement that "iOS 6.1 itself is not the issue"? You haven't mentioned anything about root cause. A particular App? One of the carriers? Is my whole "disk" being indexed? Whose code is spinning the processor so hard that the iPhone stays abnormally warm?
My Responses to your "Solutions":