I am trying to scrape myself off the floor..
You must be in heaven.. gigabit ethernet via fibre link to the internet. Half the ISP in the world have lower speed links than yours. Heck it is probably more like 80%. You need ISP grade equipment to do this.
The TC is not capable of WAN to LAN throughput that high. Sorry .. but only the very latest routers can handle gigabit internet.
You need a much faster processor than a Gen4 (Gen5 much worse) TC can muster.
http://www.smallnetbuilder.com/lanwan/router-charts/bar/74-wan-to-lan
Gen5 Extreme (same speed as Gen4 TC) managed 430mbps WAN to LAN.
Gen6 Extreme (same guts exactly as latest AC Gen5 TC) managed 325mbps WAN to LAN.
In other words the latest one is slower than the earlier one.. and guess what.. your result exactly matches the testing from smallnetbuilder who do the best testing I have found anywhere.
Note the really fast throughput on latest routers.. are using hardware NAT.
This can be problematic. It means the router is not using software rules but rather built in NAT rules of the processor.. and this is done with everything other than base NAT turned off, so no firewall, no QoS, no parental controls, or vlan or vpn or anything else but just plain old NAT.
If you want a router for a gigabit connection that provides full functionality.. you are in Cisco high end stuff.. that might make your house mortgage look wimpy.
Or you need to run a powerful i5 or something with PFSense or one of the PC based router softwares.
That kind of connection just aint gonna happen on standard router processor which is after all only 1200mhz low power CPU in the Gen4 TC.