Hi
Being a user of music computer for more than 15 years I can confirm that most of the modern DAWs can have physical inputs deactivated thus the Input Latency can equal 0. Period.
The higher latency using Core Audio on the new rMBP and iPad air is an issue that has been now identified and recognized by enough users on other forums to make it real and official to me.
This is an unacceptable issue to me has even Microsoft has resolved this problem since Windows 7. So Apple is going back with native audio performance equivalent of Windows XP ???
I was about to buy the higher end 15" rMBP, because on paper, it looks amazing.
After few researches, it seems to have overheating and performance freezing issues. Fans going hyper fast and loud (a big issue in home studios where you have improved and engineerd the acoustics of your mixing space room). And now a latency equivalent of the 2003 Windows XP multimedia audio driver !
I know new machines always have to be fine tuned as users discover issues , but if this latency thing cannot be fixed by a software or firmware update, it makes too many letdowns for a computer that price ... I'll be sadly obliged to buy another brand than Apple...
If the problem is hardware side and cannot be fixed, they better change the audio chipset ASAP no matter how complicated that might be, because they might just loose all the pro audio users there (including me), the word is spreading fast ...