On July 9, 2015, I'm having a similar problem after migrating from 10.7.5 to Yosemite 10.10.4
That is, I have a main Cinema Display on the left which has always had the login screen so I could chose one or the other of my user accounts.
My second monitor (Viewsonic) on a second video card in the MacPro workstation) extends my desktop to my right.
Now, After Yosemite installation, the login window appears on the right whether or not the monitor is turned off (either visible there or simply invisible "off-screen").
Also very troubling, after this login window appears on the ('wrong') monitor to my right, the logitech bluetooth mouse is (initially) active ONLY on the Cinema Display Main monitor to my left, and (initially) I cannot move the mouse to the extended region on the Viewsonic monitor where the login window is.
After a ?minute or so the OS seems to sense my panic and a bit of apple anger and responds by finally allowing me to get 'through the locked wall.
(Posit;y related in my case -->There used to be an ability in some preference to conditionally "lockScreen", as I recall, but I can't find that.)
NOTE--> So, What I want is a way to change the location of the "startUp Login Window" from the extended Viewsonic display to the Main Cinema display on the left.
Is there a key combination to force that ?
Do I have to completely disconnect my view sonic extended monitor from my second video card and then restart ?
Would that fix work and persist as I'd like it to ?
(Note I have folders of course over the extended desktop on both monitors.)