Thanks for the feedback. I believe that I did a clean install of El Capitan. Perhaps there's some final step that I've not done, so it may not yet be completely installed. It's a long story, but my initial attempts at installing onto a newly formatted drive were thwarted by an unreliable internet connection (I think), so I had to reinstall the original Snow Leopard and upgrade from there via the App Store.
The disk is not an SSD. It's a hybrid SSHD from Seagate, with only 8GB of cache.
Here is the complete etrecheck list that I just ran again as administrator to see if it made a difference. Look forward to hearing any more feedback.
EtreCheck version: 2.9.12 (265)
Report generated 2016-06-18 21:22:20
Download EtreCheck from https://etrecheck.com
Runtime 6:38
Performance: Below Average
Click the [Support] links for help with non-Apple products.
Click the [Details] links for more information about that line.
Problem: Other problem
Description:
Superdrive now working with El Capitan
Hardware Information:ⓘ
MacBook Pro (15-inch, Late 2008)
[Technical Specifications] - [User Guide] - [Warranty & Service]
MacBook Pro - model: MacBookPro5,1
1 2.93 GHz Intel Core 2 Duo CPU: 2-core
8 GB RAM Upgradeable - [Instructions]
BANK 0/DIMM0
4 GB DDR3 1067 MHz ok
BANK 0/DIMM1
4 GB DDR3 1067 MHz ok
Bluetooth: Old - Handoff/Airdrop2 not supported
Wireless: en1: 802.11 a/b/g/n
Battery: Health = Normal - Cycle count = 2
Video Information:ⓘ
NVIDIA GeForce 9400M - VRAM: 256 MB
Color LCD 1440 x 900
LED Cinema Display 1920 x 1200
NVIDIA GeForce 9600M GT - VRAM: 512 MB
System Software:ⓘ
OS X El Capitan 10.11.5 (15F34) - Time since boot: less than an hour
Disk Information:ⓘ
ST1000LM014 disk0 : (1 TB) (Rotational)
EFI (disk0s1) <not mounted> : 210 MB
Griff's SSHD (disk0s2) / : 498.96 GB (423.09 GB free)
Recovery HD (disk0s3) <not mounted> [Recovery]: 650 MB
Griff's SSHD 2 (disk0s4) /Volumes/Griff's SSHD 2 : 500.26 GB (195.28 GB free)
MATSHITADVD-R UJ-868 ()
USB Information:ⓘ
Apple Inc. Built-in iSight
Mitsumi Electric Hub in Apple Extended USB Keyboard
Mitsumi Electric Apple Extended USB Keyboard
Kensington Kensington USB/PS2 Trackball
Elgato EyeTV Diversity
Apple Inc. Apple LED Cinema Display
Apple Inc. Display iSight
Apple Inc. Apple USB audio device
Apple, Inc. Apple Internal Keyboard / Trackpad
Apple Computer, Inc. IR Receiver
Apple Inc. BRCM2046 Hub
Apple Inc. Bluetooth USB Host Controller
Firewire Information:ⓘ
WD My Book 111D 800mbit - 800mbit max
EFI (disk1s1) <not mounted> : 210 MB
My Book (disk1s2) /Volumes/My Book : 3.00 TB (2.90 GB free)
Configuration files:ⓘ
/etc/sudoers, File size 1242 but expected 2299
Gatekeeper:ⓘ
Mac App Store and identified developers
Kernel Extensions:ⓘ
/Library/Extensions
[loaded] com.paragon-software.filesystems.ntfs (14.1.187 - SDK 10.5 - 2016-06-16) [Support]
/System/Library/Extensions
[not loaded] com.elgato.driver.DontMatchAfaTech (1.1 - 2016-06-11) [Support]
[not loaded] com.elgato.driver.DontMatchCinergy450 (1.1 - 2016-06-11) [Support]
[not loaded] com.elgato.driver.DontMatchCinergyXS (1.1 - 2016-06-11) [Support]
[not loaded] com.elgato.driver.DontMatchEmpia (1.1 - 2016-06-11) [Support]
[not loaded] com.elgato.driver.DontMatchVoyager (1.1 - 2016-06-11) [Support]
/Volumes/My Book/WD Included Files/Extras/WD +TURBO Installer.app
[not loaded] com.wdc.driver.1394HP (1.0.9 - 2010-12-25) [Support]
[not loaded] com.wdc.driver.USBHP (1.0.11 - 2010-12-25) [Support]
System Launch Agents:ⓘ
[not loaded] 7 Apple tasks
[loaded] 169 Apple tasks
[running] 62 Apple tasks
System Launch Daemons:ⓘ
[not loaded] 47 Apple tasks
[loaded] 163 Apple tasks
[running] 80 Apple tasks
Launch Agents:ⓘ
[failed] com.adobe.ARMDCHelper.cc24aef4a1b90ed56a...plist (2016-06-12) [Support]
[running] com.paragon-software.NTFS.fsnotifyagent.plist (2015-12-21) [Support]
[loaded] com.paragon.updater.plist (2015-12-21) [Support]
Launch Daemons:ⓘ
[loaded] com.adobe.ARMDC.Communicator.plist (2016-06-12) [Support]
[loaded] com.adobe.ARMDC.SMJobBlessHelper.plist (2016-06-12) [Support]
[loaded] com.microsoft.office.licensing.helper.plist (2010-08-25) [Support]
[loaded] com.paragon.NTFS.launch.plist (2015-12-21) [Support]
Other Apps:ⓘ
[running] com.etresoft.EtreCheck.243552
[loaded] 413 Apple tasks
[running] 156 Apple tasks
Internet Plug-ins:ⓘ
QuickTime Plugin: 7.7.3 (2016-05-05)
AdobePDFViewerNPAPI: 15.016.20045 - SDK 10.11 (2016-06-12) [Support]
AdobePDFViewer: 15.016.20045 - SDK 10.11 (2016-06-12) [Support]
EPPEX Plugin: 10.0 (2014-10-15) [Support]
Default Browser: 601 - SDK 10.11 (2016-05-05)
SharePointBrowserPlugin: 14.6.5 - SDK 10.6 (2016-06-16) [Support]
JavaAppletPlugin: 15.0.1 - SDK 10.7 (2016-06-12) Check version
3rd Party Preference Panes:ⓘ
Paragon NTFS for Mac ® OS X (2016-06-16) [Support]
Time Machine:ⓘ
Mobile backups: OFF
Auto backup: NO - Auto backup turned off
Volumes being backed up:
Griff's SSHD: Disk size: 498.96 GB Disk used: 75.87 GB
Destinations:
TMBackup's timemachine [Network]
Total size: 2.00 TB
Total number of backups: 0
Oldest backup: -
Last backup: -
Size of backup disk: Excellent
Backup size 2.00 TB > (Disk size 498.96 GB X 3)
My Book [Local]
Total size: 0 B
Total number of backups: 0
Oldest backup: -
Last backup: -
Size of backup disk: Too small
Backup size 0 B < (Disk used 75.87 GB X 3)
merlin@magma.com.au's timemachine [Network]
Total size: 2.05 TB
Total number of backups: 12
Oldest backup: 22/05/2016, 4:39 AM
Last backup: 6/06/2016, 2:11 PM
Size of backup disk: Excellent
Backup size 2.05 TB > (Disk size 498.96 GB X 3)
Top Processes by CPU:ⓘ
62% mds
12% mds_stores
3% WindowServer
2% kernel_task
1% FileStatsAgent
Top Processes by Memory:ⓘ
689 MB kernel_task
393 MB mds_stores
319 MB mdworker(18)
74 MB WindowServer
57 MB mds
Virtual Memory Information:ⓘ
5.43 GB Free RAM
2.82 GB Used RAM (1.61 GB Cached)
0 B Swap Used
Diagnostics Information:ⓘ
Jun 18, 2016, 09:07:48 PM Self test - passed