Dear MacDegsey:
I had this happen too, yesterday, with same OSX El Capitan 10.11 on my older iMac (vintage 2009) so I contacted support who had me do various troubleshooting, including resetting NVRAM etc. Eventually they told me to reinstall OSX in place, which I did. That fixed it yesterday and it is still updating properly. I asked if this was a 'store' problem or only occurring at my end. and I was told reinstallation generally fixes this kind of error: that something may have gotten garbled in download so this worked.
Today, the identical error message appeared on my 2013 iMac OSX El Capitan 10.11 'plist parsing error' so instead of doing all these fixes, I first checked this forum (lots of others have the error) and then I went to both Apple reporting systems
https://www.apple.com/uk/support/systemstatus/
https://www.apple.com/support/systemstatus/
which both report App Store is down for some users currently.
So I waited half an hour, and went to update my old computer - it worked fine.
On my newer computer, Then I tried updating Tweetbot and it updated! I can see a new time stamp on Tweetbot.app *** of 8:37 a.m.
So this computer seems to be updating and I was successful, without doing any reinstall of El Capitan.
I'll try this out on my old 2010 laptop, but have to go to work now.... 🙂
Try waiting, and if it still doesn't work in a few hours, open a support request with Apple. I hope you don't have to reinstall El Capitan.
It was painless to reinstall, took a couple hours, but that fixed yesterday. YMMV
Regards! Thanks to Apple Support for their help.