I believe I’ve resolved this issue; at least in my case.
Just to recap:
I was unable to download and install an Apple update (10.13.2 from 10.13.1) as I was repeatedly told I need to free up 2.1GB despite already having deleted and moved (to an external HDD) over 60GB! 'Get Info' of Macintosh HD showed I had almost 92GB ‘available’ with almost 85GB ‘purgeable’. Rebooting made no difference, and neither did the 'auto backup' in Time Machine or the manage space option under iCloud properties.
Thinking Time Machine Backup was involved somehow I tried to perform a backup (since the last was 7 months ago) but it said the task wasn't able to commence as the disk was being encrypted or decrypted. Since this was a new external HDD with software to create partitions, etc. (one for my BootCamp backups) I suspected I must have selected something on this drive in the past. This MacBook Pro retina is my main Windows 10 device, and my backup device for my 2017 iMac used for Logic Pro. I went back to my previous older HDD used for backups and tried that but received the same message? Strange, since that worked okay in the past. I then checked System Preferences, Security & Privacy, and discovered that the local Macintosh HD itself was being encrypted!! ***!
This must be the issue! The other systems/tasks are unable to do anything until this task is complete. Since I last logged into the Mac partition in December (5 weeks ago) it looks like this process had never completed in the background. I was totally unaware. Why couldn't any error messages make it clear that my Mac was encrypting the local HDD in the background? A fancy little icon at the top right of the screen would also have been nice and helped! Something like a black vault icon and white key inside it, beside the Bluetooth or magnifying glass, for Spotlight Search, for instance?
Anyway, I went to bed (it was 3am!) and waited for the drive to finish encrypting overnight then rebooted it in the morning. voilà! I then had over 90GB available, and only 20MB purgeable! Yes MB, not GB! I then successfully performed a Time Machine backup! Then I downloaded and installed the latest 10.13.2 without issue! Sorted! When Apple Support called me at 11:30 I then happily told him it was resolved!
Unbelievable!