It sounds like you wish to continue using iCloud Drive but not have the contents of your Desktop and Documents and folders included in the files that get stored in iCloud Drive. Contrary to the advice given previously, quite simply all you need to to do is turn iCloud Drive syncing of Desktop and Document off.
If you turn off Desktop and Documents, (System Preferences > iCloud > iCloud Drive - Options) your files will stay in iCloud Drive in the cloud and a new folder is created on your Mac where the files you have stopped syncing will be written to.
If you don’t want the files to remain in the cloud and/or you have doubts about the automatic recovery of files to the new folder you might do the following instead...
Create a temporary folder in your home folder and move all your documents there from iCloud Drive. (this step removes the files from the cloud and moves the files on your Mac in one step.
Once complete turn off iCloud Drive for Documents and Desktop (System Preferences > iCloud > iCloud Drive - Options) and move your documents from the temporary folder to the appropriate locations (Documents/Desktop) and delete your temporary folder.