>>> UPDATE <<<
So I worked with business team to swap out my iPhone 5 and at a minimum, the situation has improved vastly. I will say also that I felt the overall image quality was lacking as well. The 4S made its focus quick and sharp and the iPhone 5 seems to be very fast and change foucs points often. When it hits the mark, its great but the 4S was very easy to shoot.
Below are (3) images I shot on walkthoughs in NYC that prompted me to post. The last image of the boat I shot in San Diego yesterday with the new iPhone 5 with ios6 that I swapped out on Friday, directly into the sun and was very pleasenlty suprised with the results.
I shoot a ton of photos for work and with my childern and came to prefer the 4S over my Canon s95 at times. The problem that I had with the first phone was that there was no direct beam of light and the purple was on eveything that I shot. I retouch a lot of what I shoot and this only made the problem much worse. A photo is what you see though the lens to capature so being told that you're not holding it right isnt really an answer or an option for me.
Also, many pro users have posted about expensive DSLR having the same issues. I have a Canon 5D and a Canon 5D Mark II and have not picked up on anything, nonetheless issues like I have posted below.
All things being said, I clearly had a hardware issue that has improved my situtation with swapping out the device.