I tried what you said and still nothing worked, but here is the etrecheck list:
EtreCheck version: 2.9.13 (267)
Report generated 2016-07-22 19:17:19
Download EtreCheck from https://etrecheck.com
Runtime 2:23
Performance: Excellent
Click the [Support] links for help with non-Apple products.
Click the [Details] links for more information about that line.
Problem: Other problem
Description:
Some Apple applications and Microsoft applications won’t allow me to click anything on them
Hardware Information:ⓘ
MacBook Air (11-inch, Mid 2013)
[Technical Specifications] - [User Guide] - [Warranty & Service]
MacBook Air - model: MacBookAir6,1
1 1.3 GHz Intel Core i5 CPU: 2-core
4 GB RAM Not upgradeable
BANK 0/DIMM0
2 GB DDR3 1600 MHz ok
BANK 1/DIMM0
2 GB DDR3 1600 MHz ok
Bluetooth: Good - Handoff/Airdrop2 supported
Wireless: en0: 802.11 a/b/g/n/ac
Battery: Health = Normal - Cycle count = 637
Video Information:ⓘ
Intel HD Graphics 5000
Color LCD 1366 x 768
System Software:ⓘ
OS X El Capitan 10.11.6 (15G31) - Time since boot: less than an hour
Disk Information:ⓘ
APPLE SSD TS0128F disk0 : (121.33 GB) (Solid State - TRIM: Yes)
EFI (disk0s1) <not mounted> : 210 MB
Macintosh HD (disk0s2) / : 103.70 GB (29.69 GB free)
Recovery HD (disk0s3) <not mounted> [Recovery]: 17.16 GB
USB Information:ⓘ
Apple Inc. BRCM20702 Hub
Apple Inc. Bluetooth USB Host Controller
Thunderbolt Information:ⓘ
Apple Inc. thunderbolt_bus
Configuration files:ⓘ
/etc/hosts - Count: 1
System Integrity Protection status: disabled
Gatekeeper:ⓘ
Mac App Store and identified developers
Kernel Extensions:ⓘ
/Applications/System Center 2012 Endpoint Protection.app
[loaded] com.microsoft.kext.scep_kac (4.5.21 - 2015-05-03) [Support]
/Library/Extensions
[not loaded] com.FTDI.driver.D2XXHelper (1.0 - SDK 10.11 - 2016-07-22) [Support]
[not loaded] com.ZTE.driver.ZTEUSBCDCACMData (ZTEDriver_MacV1.6.1 - SDK 10.9 - 2016-07-22) [Support]
[not loaded] com.ZTE.driver.ZTEUSBMassStorageFilter (ZTEDriver_MacV1.6.1 - SDK 10.9 - 2016-07-22) [Support]
[not loaded] com.zte.driver.cdc_ecm_qmi (1.4.1 - SDK 10.9 - 2016-07-22) [Support]
[not loaded] com.zte.driver.cdc_usb_bus (1.4.1 - SDK 10.9 - 2016-07-22) [Support]
/Library/Extensions/HuaweiDataCardDriver_10_9.kext/Contents/PlugIns
[not loaded] com.MBB.driver.MBBACMData (5.01.01.00 - SDK 10.8 - 2013-11-25) [Support]
[not loaded] com.MBB.driver.MBBActivateDriver (5.01.00 - SDK 10.8 - 2013-11-25) [Support]
[not loaded] com.MBB.driver.MBBEthernetData (5.01.01.00 - SDK 10.8 - 2013-11-25) [Support]
/System/Library/Extensions
[loaded] com.Cycling74.driver.Soundflower (1.6.6 - SDK 10.6 - 2016-07-22) [Support]
[loaded] com.epson.driver.EPSONProjectorAudio (1.30 - SDK 10.4 - 2016-07-22) [Support]
[not loaded] com.wacom.kext.wacomtablet (Wacom Tablet 6.3.15-3 - SDK 10.11 - 2016-07-22) [Support]
System Launch Agents:ⓘ
[not loaded] 6 Apple tasks
[loaded] 159 Apple tasks
[running] 73 Apple tasks
System Launch Daemons:ⓘ
[not loaded] 46 Apple tasks
[loaded] 160 Apple tasks
[running] 84 Apple tasks
Launch Agents:ⓘ
[not loaded] com.adobe.AAM.Updater-1.0.plist (2016-06-06) [Support]
[loaded] com.citrix.AuthManager_Mac.plist (2015-03-17) [Support]
[running] com.citrix.ReceiverHelper.plist (2015-03-17) [Support]
[running] com.citrix.ServiceRecords.plist (2015-03-17) [Support]
[loaded] com.oracle.java.Java-Updater.plist (2015-05-03) [Support]
[running] com.wacom.wacomtablet.plist (2015-12-17) [Support]
Launch Daemons:ⓘ
[loaded] com.adobe.agsservice.plist (2016-04-19) [Support]
[loaded] com.adobe.fpsaud.plist (2016-05-10) [Support]
[failed] com.meraki.agentd.plist (2015-11-12) [Support]
[loaded] com.microsoft.autoupdate.helpertool.plist (2016-07-21) [Support]
[loaded] com.microsoft.office.licensing.helper.plist (2014-05-09) [Support]
[loaded] com.microsoft.office.licensingV2.helper.plist (2016-01-09) [Support]
[running] com.microsoft.scep_daemon.plist (2014-10-29) [Support]
[loaded] com.oracle.java.Helper-Tool.plist (2015-05-03) [Support]
User Launch Agents:ⓘ
[loaded] com.bittorrent.uTorrent.plist (2016-04-16) [Support]
[loaded] com.google.keystone.agent.plist (2016-07-12) [Support]
[running] com.spotify.webhelper.plist (2016-07-22) [Support]
Other Apps:ⓘ
[running] com.etresoft.EtreCheck.178592
[running] com.google.Chrome.50592
[running] com.wacom.TabletDriver.15072
[running] com.wacom.WacomTouchDriver.93472
[loaded] 403 Apple tasks
[running] 188 Apple tasks
Internet Plug-ins:ⓘ
WacomTabletPlugin: WacomTabletPlugin 2.1.0.6 - SDK 10.9 (2015-12-17) [Support]
FlashPlayer-10.6: 21.0.0.242 - SDK 10.6 (2016-05-14) [Support]
QuickTime Plugin: 7.7.3 (2016-07-22)
Flash Player: 21.0.0.242 - SDK 10.6 (2016-05-14) Outdated! Update
Default Browser: 601 - SDK 10.11 (2016-07-22)
CitrixICAClientPlugIn: 11.9.15 - SDK 10.9 (2015-03-17) [Support]
SharePointBrowserPlugin: 14.4.9 - SDK 10.6 (2015-05-01) [Support]
Silverlight: 5.1.50428.0 - SDK 10.6 (2016-07-11) [Support]
MeetingJoinPlugin: Unknown - SDK 10.6 (2015-05-03) [Support]
JavaAppletPlugin: Java 8 Update 45 (2015-05-03) Check version
3rd Party Preference Panes:ⓘ
Flash Player (2016-05-10) [Support]
Java (2015-04-11) [Support]
WacomTablet (2015-12-17) [Support]
Time Machine:ⓘ
Time Machine not configured!
Top Processes by CPU:ⓘ
3% Google Chrome
2% coreaudiod
2% Google Chrome Helper(17)
1% fontd
1% kernel_task
Top Processes by Memory:ⓘ
2.16 GB Google Chrome Helper(17)
482 MB kernel_task
193 MB mdworker(15)
156 MB Google Chrome
86 MB mds_stores
Virtual Memory Information:ⓘ
107 MB Free RAM
3.89 GB Used RAM (836 MB Cached)
0 B Swap Used
Diagnostics Information:ⓘ
Jul 22, 2016, 07:16:33 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-191633_[redacted].crash
/usr/local/sbin/m_agent
Jul 22, 2016, 07:16:18 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-191618_[redacted].crash
Jul 22, 2016, 07:16:02 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-191602_[redacted].crash
Jul 22, 2016, 07:16:01 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-191601_[redacted].crash
Jul 22, 2016, 07:12:58 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-191258_[redacted].crash
Jul 22, 2016, 07:11:44 PM Self test - passed
Jul 22, 2016, 07:09:01 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-190901_[redacted].crash
Jul 22, 2016, 07:08:47 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-190847_[redacted].crash
Jul 22, 2016, 07:08:37 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-190837_[redacted].crash
Jul 22, 2016, 07:00:20 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-190020_[redacted].crash
Jul 22, 2016, 06:50:09 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-185009_[redacted].crash
Jul 22, 2016, 06:41:01 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-184101_[redacted].crash
Jul 22, 2016, 06:40:46 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-184046_[redacted].crash
Jul 22, 2016, 06:40:29 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-184029_[redacted].crash
Jul 22, 2016, 06:40:15 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-184015_[redacted].crash
Jul 22, 2016, 06:40:14 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-184014_[redacted].crash
Jul 22, 2016, 06:24:08 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-182408_[redacted].crash
Jul 22, 2016, 06:20:42 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-182042_[redacted].crash
Jul 22, 2016, 06:07:17 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-180717_[redacted].crash
Jul 22, 2016, 04:31:08 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-163108_[redacted].crash
Jul 22, 2016, 04:30:52 PM /Library/Logs/DiagnosticReports/m_agent_2016-07-22-163052_[redacted].crash
Jul 22, 2016, 07:01:45 AM /Library/Logs/DiagnosticReports/Google Drive_2016-07-22-070145_[redacted].crash
com.google.GoogleDrive - /Applications/Google Drive.app/Contents/MacOS/Google Drive