Tons of Errors when using Disk Repair

Lately Safari and has been running HORRIBLY and Logic Pro X freezes when I try to open media window. I ran disk repair from recovery mode and I get all these errors repeatedly. Any way to fix this?



Verifying file system.

Volume could not be unmounted.

Using live mode.

Performing fsck_apfs -n -l -x /dev/rdisk1s1

Checking the container superblock.

Checking the EFI jumpstart record.

Checking the space manager.

Checking the space manager free queue trees.

Checking the object map.

Checking volume.

Checking the APFS volume superblock.

The volume DJ Duke was formatted by hfs_convert (748.77.8) and last modified by apfs_kext (945.220.38).

Checking the object map.

Checking the snapshot metadata tree.

Checking the snapshot metadata.

Checking snapshot 1 of 2.

warning: Cross Check : FSroot tree references extent (0xb8cbd37 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x165): fext (phys_block_num 193772855 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0xc493613 + 14) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x165): fext (phys_block_num 206124563 len 14) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188036 + 12) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x167): fext (phys_block_num 1605686 len 12) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188042 + 9) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x168): fext (phys_block_num 1605698 len 9) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x18804b + 9) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x169): fext (phys_block_num 1605707 len 9) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188054 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16a): fext (phys_block_num 1605716 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188055 + 9) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16b): fext (phys_block_num 1605717 len 9) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x18805e + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16c): fext (phys_block_num 1605726 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x18805f + 9) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16d): fext (phys_block_num 1605727 len 9) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188068 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16e): fext (phys_block_num 1605736 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188069 + 11) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x16f): fext (phys_block_num 1605737 len 11) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188074 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x170): fext (phys_block_num 1605748 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188075 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x171): fext (phys_block_num 1605749 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188076 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x172): fext (phys_block_num 1605750 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188077 + 10) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x173): fext (phys_block_num 1605751 len 10) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188081 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x174): fext (phys_block_num 1605761 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188082 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x175): fext (phys_block_num 1605762 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188083 + 2) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x176): fext (phys_block_num 1605763 len 2) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188085 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x177): fext (phys_block_num 1605765 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188086 + 10) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x178): fext (phys_block_num 1605766 len 10) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188090 + 3) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x179): fext (phys_block_num 1605776 len 3) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188093 + 1) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x17a): fext (phys_block_num 1605779 len 1) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x188094 + 7) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x17b): fext (phys_block_num 1605780 len 7) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x18809b + 4) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x17c): fext (phys_block_num 1605787 len 4) not found in extentref tree

warning: Cross Check : FSroot tree references extent (0x18809f + 4) which is not present in the ExtentRef tree

warning: fe_val: object (oid 0x17d): fext (phys_block_num 1605791 len 4) not found in extentref tree

too many warnings generated; suppressing subsequent ones.

Checking snapshot 2 of 2.

Checking the extent ref tree.

Checking the fsroot tree.

Verifying allocated space.

Performing deferred repairs.

The volume /dev/rdisk1s1 appears to be OK.

File system check exit code is 0.

Restoring the original state found as mounted.


Operation successful.

MacBook Pro TouchBar and Touch ID, macOS Mojave (10.14.1)

Posted on Nov 21, 2018 6:31 PM

Reply
25 replies

Dec 4, 2018 10:10 PM in response to leroydouglas

I have done six or seven runs after booting to recovery mode, and three from single-user mode.


The same error messages show up every time. That is, Disk Utility is not clearing the errors.


Now to be fair, it's calling them "warnings" but the message that extents listed in an extents tree cannot be found in the actual extents storage. I have some directories that are acting corrupted and I want to fix them.


My disk is 1 GB and takes quite a while to back up or restore - on the order of 12+ hours on my slow old machine. I do have a Time Machine backup on a NAS and I'm not really looking forward to using it. Doing a restore is not desirable.

Jan 8, 2019 10:16 AM in response to 6280

Update:


I tried running Disk Utility on a third Mac of mine, a new 2018 Mac Mini, that also shares the Dropbox files with the other two MacBooks Pros.


While the Mac Mini showed no "FSroot tree references extent" warnings like the other two MacBooks Pros, it did show a warning saying: "warning: apfs_num_other_fsobjects (79) is not valid (80)".


The Mac Mini is not created from the same image as the others were a year ago.

This thread has been closed by the system or the community team. You may vote for any posts you find helpful, or search the Community for additional answers.

Tons of Errors when using Disk Repair

Welcome to Apple Support Community
A forum where Apple customers help each other with their products. Get started with your Apple Account.